New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1963216 =	61 (0.920)	6 (0.090)	5/258	7.8	9.1%	intergenic (‑79/+244)	USA300HOU_1822/hemG	possible hydrolase/protoporphyrinogen oxidase
	?	CP000730	1963268 =	61 (0.940)					intergenic (‑131/+192)	USA300HOU_1822/hemG	possible hydrolase/protoporphyrinogen oxidase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCTGTCATCTCATTCTCTCCTTTCAACTTACTACTTCTTTTCTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATAACTTAAAAATGACTATATTTCATC  >  CP000730/1963129‑1963408                                                                                                                                            |                                                                                                                                             aTCTGTCATCTCATTCTCTCCTTTCAACTTACTACTTCTTTTCTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTAt                                                                                                                                             >  1:481482/1‑141 (MQ=255)  tCTGTCATCTCATTCTCTCCTTTCAACTTACTACTTCTTTTCTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTAtt                                                                                                                                            <  1:62335/141‑1 (MQ=255)   cTGTCATCTCATTCTCTCCTTTCAACTTACTACTTCTTTTCTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTAttt                                                                                                                                           >  1:200898/1‑140 (MQ=255)       cATCTCATTCTCTCCTTTCAACTTACTACTTCTTTTCTATTTTTAAAAAAATCACTGCTTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATCTCGCAAAGTGACATTTCTAATTAAAGTGTATTGtcat                                                                                                                                       <  1:572071/141‑1 (MQ=255)          ctcATTCTCTCCTTTCAACTTAATACTTCTTTTCTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAAAAATGTTATATCGCAAAGAGACATTTCTAATTAAAGTGTATTGTcatcat                                                                                                                                    >  2:28239/1‑141 (MQ=255)           tcATTCTCTCCTTTCAACTTACTACTTCTTTTCTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCAtt                                                                                                                                   <  2:321309/141‑1 (MQ=255)                   tcCTTTCAACTTACTACTTCTTTTCTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATc                                                                                                                           >  2:438647/1‑141 (MQ=255)                     cTTTCAACTTACTACTTCTTTTCTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCAt                                                                                                                         >  2:426819/1‑141 (MQ=255)                      tttCAACTTACTACTTCTTTTCTATTTTTTTTTTTTTTTTTTTTTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAACTGTATTGTCATCATTTCAattttttt                                                                                                                        >  2:307263/1‑135 (MQ=255)                      tttCAACTTACTACTTCTTTTCTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCAtt                                                                                                                        >  1:365426/1‑141 (MQ=255)                            cTTACTACTTCTTTTCTATTTTTAAAAAAATGACTGAATACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACAACTCTAATTAAAGTGTATTTTCATCATTTCAATATCATTCaaaaa                                                                                                                  >  2:579986/1‑141 (MQ=255)                              tactacTTCTTTTCTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACa                                                                                                                >  1:387558/1‑141 (MQ=255)                               actactTCTTTTCTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAg                                                                                                               >  2:414734/1‑141 (MQ=255)                                ctactTCTTTTCTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGc                                                                                                              >  2:454723/1‑141 (MQ=255)                                          tCTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTTTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTg                                                                                                    >  2:63053/1‑141 (MQ=255)                                          tCTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTg                                                                                                    >  1:666342/1‑141 (MQ=255)                                           cTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGt                                                                                                   <  2:464817/141‑1 (MQ=255)                                                 ttATAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTTATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGc                                                                                             >  2:588214/1‑141 (MQ=255)                                                 ttAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGc                                                                                             <  1:390040/141‑1 (MQ=255)                                                      aaaaTGACTGATTACCTATAATTGTAAAATAAAAATACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAACTAAACCTTTGTCTCTGCTTCaa                                                                                        >  2:343600/1‑141 (MQ=255)                                                      aaaaTGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCaa                                                                                        >  2:304376/1‑141 (MQ=255)                                                       aaaTGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAAt                                                                                       <  1:138919/141‑1 (MQ=255)                                                       aaaTGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAAt                                                                                       >  2:300161/1‑141 (MQ=255)                                                        aaTGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAACGTGTATTGTCATCCTTTCAATATCTTTCAAAAACAGCTAAACCTTTGTCTCTGCTTCCAtt                                                                                      <  2:540962/141‑1 (MQ=255)                                                        aaTGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAAtt                                                                                      >  1:275987/1‑141 (MQ=255)                                                                aTTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTATAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACaaaa                                                                              >  1:325032/1‑141 (MQ=255)                                                                  tACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTTAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAaat                                                                            <  1:600198/141‑1 (MQ=255)                                                                       ataATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTc                                                                       <  1:562252/141‑1 (MQ=255)                                                                       ataATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTc                                                                       <  1:389295/141‑1 (MQ=255)                                                                        taATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTcc                                                                      >  2:509483/1‑141 (MQ=255)                                                                         aaTTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTccc                                                                     <  2:387558/141‑1 (MQ=255)                                                                             gTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTg                                                                 <  1:256491/141‑1 (MQ=255)                                                                                aaataaaaACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGaaa                                                              >  1:56052/1‑141 (MQ=255)                                                                                  ataaaaACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGt                                                            >  2:768758/1‑141 (MQ=255)                                                                                     aaaaCACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATc                                                         <  1:768758/141‑1 (MQ=255)                                                                                      aaaCACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCt                                                        <  2:56052/141‑1 (MQ=255)                                                                                       aaCACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCta                                                       >  1:348494/1‑141 (MQ=255)                                                                                         cacCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCtata                                                     <  2:365426/141‑1 (MQ=255)                                                                                               aaTTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTaca                                               <  1:262109/141‑1 (MQ=255)                                                                                                aTTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTacac                                              <  2:735457/141‑1 (MQ=255)                                                                                                aTTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTAAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTacac                                              <  2:225077/141‑1 (MQ=255)                                                                                                   aGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTc                                                                                                                                 <  1:206477/55‑1 (MQ=255)                                                                                                   aGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTc                                                                                                                                 >  2:206477/1‑55 (MQ=255)                                                                                                     aaaTGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATAttt                                                  >  2:428893/1‑132 (MQ=255)                                                                                                     aaaTGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATAttt                                                  <  1:428893/132‑1 (MQ=255)                                                                                                      aaTGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACt                                        >  2:262295/1‑141 (MQ=255)                                                                                                         gTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTcc                                     >  2:37962/1‑141 (MQ=255)                                                                                                          ttATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTcca                                    >  2:727333/1‑141 (MQ=255)                                                                                                              atCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCAt                                >  2:265945/1‑141 (MQ=255)                                                                                                                     aGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATaa                         <  1:262295/141‑1 (MQ=255)                                                                                                                      gTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATAAc                        <  1:37962/141‑1 (MQ=255)                                                                                                                       taaCATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTCCCACCATTATATAACt                       <  2:673986/139‑1 (MQ=255)                                                                                                                       tGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATAACt                       <  2:528329/141‑1 (MQ=255)                                                                                                                       tGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATAACt                       <  1:509483/141‑1 (MQ=255)                                                                                                                         aCATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATAACTTa                     >  2:711808/1‑141 (MQ=255)                                                                                                                              tCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATAACTTAAAAAt                <  2:550263/141‑1 (MQ=255)                                                                                                                                tAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATAACTTAAAAATGa              >  2:98223/1‑141 (MQ=255)                                                                                                                                 aaTTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATAACTTAAAAATGAc             <  1:307263/141‑1 (MQ=255)                                                                                                                                    tAAAGTGTATTGCCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTCCATCAATTTCACAAACATAATTCCCGCTGACAGTATCAATATTTACACCTTACTTCCACCCTCATATAACTTAAAAATGACcat          >  2:147467/1‑141 (MQ=255)                                                                                                                                      aaGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATAACTTAAAAATGACTatat        <  2:728401/141‑1 (MQ=255)                                                                                                                                      aaGTGCATTGTCATCATTTCAATATCATTCAAAAACAGCTAAGCCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATAACTTAAAAATGACTatat        <  1:667089/141‑1 (MQ=255)                                                                                                                                        gtgtATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATAACTTAAAAATGACTATAttt      >  2:442472/1‑141 (MQ=255)                                                                                                                                          gtATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATAACTTAAAAATGACTATATTtca    >  1:606862/1‑141 (MQ=255)                                                                                                                                           tATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATAACTTAAAAATGACTATATTtcat   <  2:481139/141‑1 (MQ=255)                                                                                                                                            aTTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATAACTTAAAAATGACTATATTtcatc  <  2:490116/141‑1 (MQ=255)                                                                                                                                            |                                                                                                                                             ATCTGTCATCTCATTCTCTCCTTTCAACTTACTACTTCTTTTCTATTTTTAAAAAAATGACTGATTACCTATAATTGTAAAATAAAAACACCTTAATTAGAAATGTTATATCGCAAAGTGACATTTCTAATTAAAGTGTATTGTCATCATTTCAATATCATTCAAAAACAGCTAAACCTTTGTCTCTGCTTCAATTTCACAAAAATAATTCCCGCTGAAAGTATCTATATTTACACATTACTTCCACCATTATATAACTTAAAAATGACTATATTTCATC  >  CP000730/1963129‑1963408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.