New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 872429	46 (0.990)	3 (0.070)	3/262	NT	6.3%	coding (540/912 nt)	gsiD	glutathione ABC transporter permease
	?	NC_000913_3_bme_pgi	= 872441	45 (1.000)					coding (552/912 nt)	gsiD	glutathione ABC transporter permease

GCTGATCATGCGCATTTGCGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGTTTTTCACCATGCGCATTGGTACCTCG  >  NC_000913_3_bme_pgi/872294‑872588                                                                                                                                                    |                                                                                                                                                    gCTGATCATGCGCATTTGCGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCg                                                                                                                                                    <  1:625944‑M2/149‑2 (MQ=255)       cATGCGCATTTGGGATGTGTTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTCCCCGCCTGGTGCGCGGCAaca                                                                                                                                              <  2:792476/149‑1 (MQ=255)       cATGCGCATTTGCGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGAGCGCTTTTGTTGCGGTGTTGGGAAGCGGCAGTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAaca                                                                                                                                              <  1:353724/149‑1 (MQ=255)              aTTTGGGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGgt                                                                                                                                       >  2:152372/1‑149 (MQ=255)                        tgCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAg                                                                                                                             >  1:888900/1‑149 (MQ=255)                                 gctgcctgggTAGTTTTCTGGTGGTTGCTGTTGTTGCTGTGTTGGGAAGCGGCATTGCTAACGTTATTATTGCAGTCGCCATTTTTTCCATCACCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCttt                                                                                                                    <  2:63890/142‑1 (MQ=255)                                  cTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTACCGTGATTATTGCAGTCGCCATTTATTCCATCACCGCGTTTACCCGCATGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAACCCTTTa                                                                                                                   >  1:18198/1‑149 (MQ=255)                                   ttCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAac                                                                                                                                               >  2:424435/1‑120 (MQ=255)                                   ttCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAac                                                                                                                                               <  1:424435/120‑1 (MQ=255)                                   ttCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAAc                                                                                                                        <  2:261711/143‑1 (MQ=255)                                   ttCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAAc                                                                                                                        >  1:261711/1‑143 (MQ=255)                                    tgtcGGGTATTTTACTGGCGATCGCTTTTGTTGGGGTGTTTGGAAGCGGTATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTAtt                                                                                                                 <  2:575740/146‑1 (MQ=255)                                      ccGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGa                                                                                                               >  1:816351/1‑149 (MQ=255)                                        gggTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGCGATTATTGCAGTCGCCATTTTTTCCATCCCCGCTTTTGCCCGCCTGTTGCCCGGCACCACGCTGGTTCTTAAACACCAAACCTTCCTTGaac                                                                                                             >  1:656312/1‑147 (MQ=255)                                             ttttACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCa                                                                                                        >  1:461318/1‑149 (MQ=255)                                             ttttACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCACGGAGACACTCGTTTGTTGAAACAGCAAACCTTTATTGAGTCAGCa                                                                                                        >  1:468753/1‑149 (MQ=255)                                                  cTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAg                                                                                                   >  1:315039/1‑149 (MQ=255)                                                     gCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTAt                                                                                                <  1:588407/149‑1 (MQ=255)                                                       gATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTg                                                                                              >  1:819362/1‑149 (MQ=255)                                                         ggggtgttgtGTCGGGGTTGGGGCGCGGAATTGGTAATGTGTTTATTGTAGTCGGCATTTTTGCCATCCCCGCGTTTGCCCGCCTGTGGCGCGGCAACACGGTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGTAGTATTGGt                                                                                            <  2:402319/145‑1 (MQ=255)                                                              gttgttGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTAGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAg                                                                                       >  1:842665/1‑149 (MQ=255)                                                                 gttgCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTAGTGCCAGCGa                                                                                    <  2:686312/149‑1 (MQ=255)                                                                    gCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGatat                                                                                 >  1:637392/1‑149 (MQ=255)                                                                      ggTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGa                                                                               >  1:612705/1‑149 (MQ=255)                                                                       gtgtTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCTAGCGATATGAc                                                                              <  2:479053/149‑1 (MQ=255)                                                                          gtgagAAGCGGCATTGATAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCGCGCCTGCTGCGCGGCAACACGCGCGTGTTTAAACATCAAACCTTTATTGAGTCACCACGCAGTATTGATGCCATCGCTACTACCgc                                                                           >  2:616597/5‑148 (MQ=255)                                                                               aaGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGATGTTGAAACGGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATAACCGTTtagt                                                                      >  1:431151/1‑149 (MQ=255)                                                                                aGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTttgtt                                                                     <  2:625944/149‑1 (MQ=255)                                                                                  ggtcATTGCTAAAGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGc                                                                   <  1:398568/146‑1 (MQ=255)                                                                                   ggCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGCGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCg                                                                  <  2:736937/149‑1 (MQ=255)                                                                                    gCATTGCTAACTTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGt                                                                 <  1:682743/149‑1 (MQ=255)                                                                                      aTTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCa                                                               <  1:509517/149‑1 (MQ=255)                                                                                          cTAACGTGATTATTGCAGTCGCCATTTTTTTCATCGCCGCGTTTGCCCGCCTGGTGCGCggcaaacgcggggctggaaaaaatggcgactgcaataatcacgttagcaattccgcttcccaccaccgcaacaacagcgatcgccaggaa                                                           <  1:438327‑M2/149‑91 (MQ=255)                                                                                              cGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATcctgc                                                       <  1:152372/149‑1 (MQ=255)                                                                                                  attattGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCTTGCCTgg                                                   >  2:234260/1‑149 (MQ=255)                                                                                                    tattGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGTCTGGGa                                                 <  2:630871/149‑1 (MQ=255)                                                                                                    tattGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGa                                                 <  2:888900/149‑1 (MQ=255)                                                                                                      ttGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATAACCGTTTTGTTGCGTCATATCCTGCCTGGGAcc                                               >  1:598136/1‑149 (MQ=255)                                                                                                         tggTCGGCTTTTTTTCCTTCCCTGCTTTTGGCCGCCTGGTGCTCGGCAACACGCTGGTGTTGATACAGCAAACCTTTATTGAGTCTGCACGCAGTATTGGTGCCAGCGATATGTCCGTTTTGTTGCTTCATATCCTGCCTGGGACCGtc                                            <  1:221425/147‑1 (MQ=255)                                                                                                            tCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTctct                                         >  1:45082/1‑149 (MQ=255)                                                                                                               ccATTTTTTCCGTCCCCGCGTTTGCCCGCCTGGTGGGCggcaaacgcggggatggaaaaaatggcgactgcaataatcacgttagcaatgccgcttcccaacaccgcaacaacagcgatcgccagtaaaatacccgggaaggcaaacag                                      >  2:438327‑M2/1‑38 (MQ=255)                                                                                                                  ttttttCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATc                                   >  1:899254/1‑149 (MQ=255)                                                                                                                  tttttaCCACCCCCTGGTTTGCCCGCCTGGTGCGCGTCAACCCGCTGGTGTTGAAGCAGCAAACCTTTATTGAGTCAGCACGCATTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGTCTGGGACCGTCTCGTCTATc                                   <  2:60192/149‑1 (MQ=255)                                                                                                                     tttCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGAAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCgtg                                <  1:20246/149‑1 (MQ=255)                                                                                                                          aTCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCCTCATATCCTCCCTGGGACCGTCTCTTCTATCGTGGCGtt                           >  2:876735/1‑149 (MQ=255)                                                                                                                          aTCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGATTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTCTCGTGGTGtt                           >  2:193453/1‑149 (MQ=255)                                                                                                                             cccggcgttGTCCGCCTGGTGCGCGGCAAGACGTGTGTTTTGAACCAGCAAACCTTTATTGAGTCCGCATGCAGTATTGGTGCCAGCGATATGACCGCTTTGTTGCTTCTTATCCTGCCTTGGACCGTCTCTTCTATCGTGGTGttttt                        <  2:51504/142‑1 (MQ=255)                                                                                                                             cccGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGttttt                        >  1:42301/1‑149 (MQ=255)                                                                                                                              ccGCGTTTGCCCGCCTGGTGCGGggcaacacgcggggttggaaaaaatggcgactgcaaaaatcacgttagcaatgccgcttcccaacaccgcaacaacagcgatcgccagtaaaataccccggaaggcaaacagcacaccgcaagtgc                       <  2:795697‑M2/149‑127 (MQ=255)                                                                                                                              ccGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGTTTTTc                       >  1:88221/1‑149 (MQ=255)                                                                                                                                   tttGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGTTTTTCACCAt                  >  1:352422/1‑149 (MQ=255)                                                                                                                                       cccGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGCCCGTCTCTTCTATCGTGGTGTTTTTCACCATgcgc              >  2:603739/1‑149 (MQ=255)                                                                                                                                               gTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGTTTTTCACCATGCGCATTGGTAc      <  1:509221/149‑1 (MQ=255)                                                                                                                                                 gcgcGGTAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGTTTTTCACCATGCGCATTGGTACCt    <  2:431151/149‑1 (MQ=255)                                                                                                                                                   gcgGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGTTTTTCACCATGCGCATTGGTACCTCg  >  2:748451/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GCTGATCATGCGCATTTGCGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGTTTTTCACCATGCGCATTGGTACCTCG  >  NC_000913_3_bme_pgi/872294‑872588

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.