New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi 1207790 =23 (0.420)22 (0.450) 19/254 2.2 49.8% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913_3_bme_pgi 1209619 = 24 (0.490)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

CAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGG  >  NC_000913_3_bme_pgi/1207644‑1207937
                                                                                                                                                  |                                                                                                                                                   
tacggtggtggaggCATCCGGTGCCAGCCTGGAAAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGAAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                                   <  2:939277‑M1/145‑1 (MQ=255)
cAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTAAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                                   <  1:946855‑M1/149‑1 (MQ=255)
 aGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCCCTGTGCAAACGGCTCTCGAAAACCTTGG                                                                                                                                                  >  1:48988‑M1/1‑149 (MQ=255)
  tcctgcacagttcagcgcattacgttgtagctctgtgttctggtcatttgttgatacgcgtacatagccaataagcatggtaaatccccatggtcactacagttaagatgccatttgcttgttgtttgttacttttcataaacgttgag                                                                                                                                                 <  1:282878‑M1/5‑3 (MQ=255)
   cGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTT                                                                                                                                                <  1:655795‑M1/149‑1 (MQ=255)
    gtggtgGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCTAACGGCTCTCGAAAACCTTGGTTT                                                                                                                                               <  1:872015‑M1/149‑1 (MQ=255)
    ggggtggagGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGAGGTCACTGTGCAAACGGCTCTCGAAAACCTTGGTTT                                                                                                                                               <  2:971418‑M1/147‑1 (MQ=255)
     tggtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTG                                                                                                                                              <  1:565018‑M1/149‑1 (MQ=255)
     tggtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTG                                                                                                                                              >  1:67375‑M1/1‑149 (MQ=255)
       cacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTggg                                                                                                                                            >  1:630358‑M1/140‑149 (MQ=255)
        tggAGGCATCGCGGGCCAGCCTGGAGAAGGGGCGGCACGACTAGTTACTTTCCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA                                                                                                                                           <  2:495763‑M1/149‑1 (MQ=255)
        actgttcagcgctttacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatcctcctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataatcgTTGGTTTGGga                                                                                                                                           >  2:18264‑M1/139‑149 (MQ=255)
          gAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGA                                                                                                                                         >  2:788909‑M1/1‑149 (MQ=255)
            ttcagcgcattacgttgtagagctgtgttctggtcatttgttgatacgcgtacatagacaatacgcatgttaaatccccctggaaaaagcaggaatgatgccattagcttgttatttcttcattttcataaacgttggtttgtggaaag                                                                                                                                       <  2:874759‑M1/15‑8 (MQ=255)
                tCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCCCTGTGCAAACGCCTCTCGAAAACCTTGGTTTGGGAGAAGGAGc                                                                                                                                   >  1:114193/1‑149 (MQ=255)
                   tgtGCCAGCGTGGAGAATGGGCGGCACGAGCAGTTACTTACCGGACTTCGCGAGCTGCTGTTAAGCCGCAAGCACCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgc                                                                                                                                <  2:255586‑M1/148‑7 (MQ=255)
                    gTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTCAGCCGCAAGAATCCGTTTGGCGATATCACATCGGATGGCCCTGTGCAAACGGCTCTCGAAAAACTTCGCTTGAGAGAAGActctgca                                                                                                                               >  2:981059‑M1/1‑142 (MQ=255)
                        cgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCa                                                                                                                           <  1:551734‑M1/27‑1 (MQ=255)
                        cAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattac                                                                                                                           >  2:823906‑M1/1‑138 (MQ=255)
                        cAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattac                                                                                                                           <  2:905382‑M1/149‑12 (MQ=255)
                          gCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAAt                                                                                                                         <  1:590612/149‑1 (MQ=255)
                              ggAGAAGGGGCGGCACGACCAGTCACTTACCGTACTGCTCGCGCTGATGACTAACCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgcag                                                                                                                     <  1:984245/149‑1 (MQ=21)
                              cgagacGGGGGCGCACGACCAGTTACTTACCGCACGTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGCTATCAAATCGGATGGCACTGTGCAAACGGCTCTCCTGGTTGTTGGTTTGGGAGAAGGctctgcattacctgttg                                                                                                                     <  2:676919‑M1/148‑18 (MQ=255)
                                atctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgtt                                                                                                                                                    <  2:570393‑M1/2‑1 (MQ=255)
                                atctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgtt                                                                                                                                                    >  1:570393‑M1/115‑116 (MQ=255)
                                       gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGAAGGCACTGTGCAAACGGTTCTCGAAAACCTTGGGTTGGGCGAAGGAGCAAAAGGCAATGCAGCAACAGCTa                                                                                                            >  2:99150/1‑149 (MQ=18)
                                          gcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttc                                                                                                         <  1:422958‑M1/149‑30 (MQ=255)
                                            gtcatttgttgatacgcttacatagccaataagcatgttaaatccccctggtaacagcaggaatgatgccatttgcttgttatttcttcgttttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                                                                       >  2:760719‑M1/103‑149 (MQ=255)
                                               aCCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                                                                                    <  1:518575/149‑1 (MQ=255)
                                                   gTTACTTACCGCACGTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcctt                                                                                                <  1:762098‑M1/149‑39 (MQ=255)
                                                    ttacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                                                                               >  2:127866/1‑149 (MQ=255)
                                                      gatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGAGGCACCg                                                                                             <  1:448113‑M1/57‑1 (MQ=255)
                                                      acttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCg                                                                                             <  1:989177/149‑1 (MQ=255)
                                                      acgtaccgcACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcag                                                                                             <  2:433328‑M1/146‑42 (MQ=255)
                                                       cttacCGCACGTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc                                                                                            <  1:553856‑M1/149‑43 (MQ=255)
                                                       atacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgctggttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACcga                                                                                            <  1:213921‑M1/58‑2 (MQ=255)
                                                          acCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGCGAATGAGCAAAACTCAATGCAGCAACGGCTACCTTAGGACGCACCGGttt                                                                                         >  1:639454/1‑149 (MQ=255)
                                                          acCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCCACGGCTACATTAGGACGCACCGGttt                                                                                         >  2:478562/1‑149 (MQ=255)
                                                              tacataggcaataagcatgttcgttcgtgctgggataaggaggaatgatgtcatttgctttttatttctgcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTGAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                                     >  2:667153‑M1/85‑149 (MQ=255)
                                                                 ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcca                                                                                  >  1:392590‑M1/1‑97 (MQ=255)
                                                                     cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacag                                                                              <  1:802560‑M1/149‑57 (MQ=255)
                                                                      caataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc                                                                             <  2:974514‑M1/73‑1 (MQ=255)
                                                                             tgTTAAGCCGCAAGAATCCGATTGCCGCTATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGAACGCACCGGTTTCATAGCTATACCGGTTATg                                                                      >  2:621216/1‑149 (MQ=255)
                                                                               ttAAGTCGCAAAAATCCGTTCTGCCAGATCAAATCGGATGGCATTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                                                    <  2:416037/149‑1 (MQ=37)
                                                                               tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAAGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                                                    <  1:236237‑M1/82‑1 (MQ=255)
                                                                                gttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcctcattttcataatcgTTGGTTTGAGAGAAGGAGCAAAAATCAATGCAGCAAGGGCTACATTAGGACGCACCGGTTTCATAGCTATAGCGGTAAGGAtt                                                                   <  1:914086‑M1/83‑1 (MQ=255)
                                                                                      gCAAGAATCCGTTGGGCGATATCAACTCGGATGGCACTGTGCAAACGGCTCTCGCCAACCTTGGTTTGGGAGAAGGCGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATACCTATACCGGTTATGATTggtggt                                                             <  2:363382/149‑1 (MQ=255)
                                                                                         aGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggt                                                          <  2:67375‑M1/149‑77 (MQ=255)
                                                                                           ctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAACTATACCCGTTATGATTGGTGgtatgga                                                        <  2:150825‑M1/94‑4 (MQ=255)
                                                                                           aaTCCGGTTGGTGTTATCAAATCGTATGGCACTGTGCAAACGGCGCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                        <  2:553773/149‑1 (MQ=38)
                                                                                                gTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                                                                                  <  1:634718‑M1/70‑5 (MQ=255)
                                                                                                gTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                                                                                  >  2:634718‑M1/1‑66 (MQ=255)
                                                                                                aaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                   >  2:751394‑M1/51‑149 (MQ=255)
                                                                                                aaaagcaggaaggatgccatttgcttgttatttcttcatattcataaacgGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                   >  1:85594‑M1/51‑149 (MQ=255)
                                                                                                 tttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttt                                                  >  1:336970‑M1/1‑65 (MQ=255)
                                                                                                     gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGCCTGGAAGAAGGcccggcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttct                                              >  2:871046‑M1/1‑61 (MQ=255)
                                                                                                      cGATATCGAGTCGGATGGCACGCGGCAACTGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCCAAACCCAATGCAGCCACGGTTACATTAGGACGCCCCGGGTTCATAGCTTTACCGGTTACGATTGGTGGTATTTACCAATCAGTaa                                             <  2:233951/149‑1 (MQ=25)
                                                                                                           tgacgcccttggcttgttatttcctcatttttatagacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACTCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt                                        >  2:385819‑M1/40‑149 (MQ=255)
                                                                                                           tCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa                                        <  1:823906‑M1/149‑95 (MQ=255)
                                                                                                           tCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGCTTCATAGCTATCCCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAtt                                        <  2:545967/149‑1 (MQ=255)
                                                                                                            gatgccatttgtttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTc                                       >  1:840920‑M1/39‑149 (MQ=255)
                                                                                                             aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaaga                                      >  1:690873‑M1/1‑53 (MQ=255)
                                                                                                             aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAAATCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCa                                      >  1:898539/1‑149 (MQ=255)
                                                                                                              tgccctttgcttgttatttcttcactttcataaacgTTGTTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAg                                     >  1:485386‑M1/37‑149 (MQ=255)
                                                                                                              aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagca                                     >  2:65905‑M1/1‑52 (MQ=255)
                                                                                                                caatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTg                                   >  2:811439‑M1/35‑149 (MQ=255)
                                                                                                                  atttgcttgttatttctgcattttcataaaggTTGGTTTGGTAGACGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCAGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggg                                 >  2:432286‑M1/33‑149 (MQ=255)
                                                                                                                   gATGGCACTGTGCAAACGGCTCTCGAACACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcccctccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaataccc                                <  1:678503‑M1/149‑103 (MQ=255)
                                                                                                                   gATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtaccgctttttctgctgaagaataccc                                >  2:783934‑M1/1‑47 (MQ=255)
                                                                                                                     tGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGt                              <  2:567753/149‑1 (MQ=255)
                                                                                                                       gCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagctactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaa                            <  1:788909‑M1/149‑107 (MQ=255)
                                                                                                                         aCTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGaa                          <  1:644597/149‑1 (MQ=255)
                                                                                                                          gttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCCGTGGCGGTggatt                         <  2:470251‑M1/125‑3 (MQ=255)
                                                                                                                          gttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAAt                         <  2:982732‑M1/125‑1 (MQ=255)
                                                                                                                          gttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAAt                         <  1:467655‑M1/125‑1 (MQ=255)
                                                                                                                          ctatcccaacgtctctCGAAACCTCTGGGTTGGGAGAAGGctcttcattacctgttactgtcccgactccgttgccttcagccactccgccaacaggcaggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactg                         <  2:270317‑M1/142‑110 (MQ=255)
                                                                                                                           tgtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCCGTGGGCGTGGAATg                        >  2:175314/1‑149 (MQ=255)
                                                                                                                             tgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggca                      <  2:198377‑M1/149‑113 (MQ=255)
                                                                                                                             tgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                      <  1:478562/149‑1 (MQ=255)
                                                                                                                             ggCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                      <  1:986193/148‑1 (MQ=255)
                                                                                                                             atttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                      >  2:6502‑M1/22‑149 (MQ=255)
                                                                                                                                aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggttccgttttttctgctgaagcacacccgtaaccgggaatg                   <  2:526523‑M1/149‑116 (MQ=255)
                                                                                                                                aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACCACATGTGGCAACGGCTGCTGTATGACGCACCGGTTTCATAGCTATACAGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCa                   >  1:239551/1‑149 (MQ=255)
                                                                                                                                 aaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg                  <  1:927728‑M1/149‑117 (MQ=255)
                                                                                                                                  aCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggc                 >  1:789464‑M1/1‑32 (MQ=255)
                                                                                                                                       tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatc            <  2:392590‑M1/149‑123 (MQ=255)
                                                                                                                                        ttcataaacgTTGGTGTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATc           >  1:525735‑M1/11‑149 (MQ=255)
                                                                                                                                           gAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCGACGGCTACATTAGGCCGCAGCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGNGTGGANTGCCGACAAAGAATCTGc        >  1:144953/1‑149 (MQ=255)
                                                                                                                                                 gTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgg  <  1:902552‑M1/148‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
CAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGG  >  NC_000913_3_bme_pgi/1207644‑1207937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.