New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_pgi	= 1425331	67 (1.190)	10 (0.190)	10/270	4.8	12.9%	intergenic (+92/‑46)	trkG/ynaK	Rac prophage; potassium transporter subunit/Rac prophage; conserved protein
	?	NC_000913_3_pae_pgi	= 1425343	71 (1.320)					intergenic (+104/‑34)	trkG/ynaK	Rac prophage; potassium transporter subunit/Rac prophage; conserved protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCCTGTTATTATATTGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGC  >  NC_000913_3_pae_pgi/1425197‑1425491                                                                                                                                                   |                                                                                                                                                      tCCTGTTATTATATTGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGctgctg                                                                                                                                                    >  1:533445/1‑150 (MQ=255)   cTGTTATTATATTGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTggg                                                                                                                                                  <  1:836939/150‑1 (MQ=255)   cTGTTATTATATTGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTggg                                                                                                                                                  <  2:778756/150‑1 (MQ=255)          tataTTGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGTCGTAGACATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGtt                                                                                                                                           <  1:963676/150‑1 (MQ=255)          tataTTGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGACTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGtt                                                                                                                                           <  1:932227/150‑1 (MQ=255)              ttGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTACCCAGTAGCACTGCCTGTTAGGCTTCTTTTTAt                                                                                                                                       >  2:102942/1‑150 (MQ=255)              ttGTTTTCAGGTTTTTTTTGGCGATCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTAt                                                                                                                                       <  2:117079/150‑1 (MQ=255)                             ttttGGCGCTCCTAATTTATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCt                                                                                                                        <  2:469687/150‑1 (MQ=255)                               ttGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGt                                                                                                                      >  2:640175/1‑150 (MQ=255)                                   ggcTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGa                                                                                                                  <  2:233392/149‑1 (MQ=255)                                   cgcTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGa                                                                                                                  <  2:104284/150‑1 (MQ=255)                                    gcTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACTACCTTTACATCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATgcg                                                                                                                 >  2:846019/1‑148 (MQ=255)                                     cTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGc                                                                                                                <  2:870970/150‑1 (MQ=255)                                      tCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCg                                                                                                               >  1:405400/1‑150 (MQ=255)                                        cTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCgag                                                                                                             >  2:188673/1‑150 (MQ=255)                                         tAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCgagg                                                                                                            >  2:848961/1‑149 (MQ=255)                                                  gCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAgg                                                                                                                          >  2:282940/1‑127 (MQ=255)                                                  gCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAgg                                                                                                                          <  1:282940/127‑1 (MQ=255)                                                  gCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGa                                                                                                   >  2:118068/1‑150 (MQ=255)                                                     gATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGGGAGATTGAAGATAg                                                                                                >  1:560219/1‑150 (MQ=255)                                                           taATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATc                                                                                          >  2:959195/1‑150 (MQ=255)                                                                gtgAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTaaa                                                                                                     >  2:977627/1‑134 (MQ=255)                                                                gtgAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTaaa                                                                                                     <  1:977627/134‑1 (MQ=255)                                                                     tttAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAgg                                                                                                                          <  2:553314/108‑1 (MQ=255)                                                                     tttAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAgg                                                                                                                          >  1:553314/1‑108 (MQ=255)                                                                     tttAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGCAATTAAAGATAGTCTATCGCCCAtttag                                                                                >  2:493688/1‑147 (MQ=255)                                                                     tttAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACa                                                                                >  1:430543/1‑150 (MQ=255)                                                                      ttAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACaa                                                                               <  2:533445/150‑1 (MQ=255)                                                                      ttAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACaa                                                                               <  2:820124/150‑1 (MQ=255)                                                                       tAATATTATGTTGACTCACTTATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAg                                                                              <  2:571686/150‑1 (MQ=255)                                                                         atatTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTACCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAAGCTGTATGAGCGAGAAATTAAAAATATTATATCCACCAATACAaaaa                                                                            >  1:214734/1‑150 (MQ=255)                                                                           attatGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACa                                                                                <  1:912226/144‑1 (MQ=255)                                                                           attatGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACa                                                                                >  2:912226/1‑144 (MQ=255)                                                                               tGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCgag                                                                                                             >  2:93753/1‑111 (MQ=255)                                                                               tGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCgag                                                                                                             <  1:93753/111‑1 (MQ=255)                                                                                 ttGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAACACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGACATTAAAGATAGTCTATCGCCCACTCCAACAATTGTcccc                                                                    >  2:364405/1‑150 (MQ=255)                                                                                   gACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGAGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGt                                                                  <  1:890405/150‑1 (MQ=255)                                                                                        actcaTTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAAATAGTCTATCGCCCATTACAAGAATTGTCACCGGATgcg                                                             >  1:764599/1‑150 (MQ=255)                                                                                        actcaTTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGATGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTGTATCGCCCATTACAGGAATTGTCACCGTGTgcg                                                             >  2:762344/1‑150 (MQ=255)                                                                                            aTTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCt                                                                                                                        >  1:346976/1‑87 (MQ=255)                                                                                            aTTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCt                                                                                                                        <  2:346976/87‑1 (MQ=255)                                                                                             ttGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTTTGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACaa                                                        <  1:334159/150‑1 (MQ=255)                                                                                                  ccAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑Ca                                                  <  1:118068/150‑1 (MQ=255)                                                                                                   cAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAg                                                 <  1:457910/150‑1 (MQ=255)                                                                                                     aTACCTAACTTTACCAGCAACACCGTCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGa                                               <  2:643312/150‑1 (MQ=255)                                                                                                      tACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGAc                                              <  2:814948/150‑1 (MQ=255)                                                                                                      tACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGAc                                              <  1:848451/150‑1 (MQ=255)                                                                                                         cTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGca                                           >  1:888336/1‑150 (MQ=255)                                                                                                                tACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACt                                    >  1:418648/1‑150 (MQ=255)                                                                                                                tACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACt                                    <  1:613735/150‑1 (MQ=255)                                                                                                                 aCCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTg                                   <  1:640175/150‑1 (MQ=255)                                                                                                                  ccAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGa                                  >  1:609173/1‑150 (MQ=255)                                                                                                                  ccAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGa                                  <  2:418648/150‑1 (MQ=255)                                                                                                                   cAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACACCGC‑CAGGACGCACAGTACTGAg                                 >  1:416131/1‑150 (MQ=255)                                                                                                                   cAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAg                                 >  2:32390/1‑150 (MQ=255)                                                                                                                   cAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGACTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACACGAATTGTCACCGTTTGCGC‑CCACGCACAGGACGCACCGTACTgtg                                 >  2:955390/1‑148 (MQ=255)                                                                                                                          acCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTgg                          >  2:125055/1‑150 (MQ=255)                                                                                                                          acCTCCGTCCCCAGTAACACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTgg                          >  1:859797/1‑150 (MQ=255)                                                                                                                            cTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGTTGGca                        >  2:271979/1‑150 (MQ=255)                                                                                                                            cTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGca                        >  2:845489/1‑150 (MQ=255)                                                                                                                               cGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATACAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTCATGAGCAGGTGGCACaa                     >  2:818590/1‑150 (MQ=255)                                                                                                                                    ccAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGt                <  1:859503/150‑1 (MQ=255)                                                                                                                                     cAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAAGTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTa               <  1:188673/150‑1 (MQ=255)                                                                                                                                       gTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGCAATAAAAGATCGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCCCAGTACTGAGCAGGTGGCACAACTGGTAGa             >  1:38693/1‑150 (MQ=255)                                                                                                                                        tAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGaa            >  2:713714/1‑150 (MQ=255)                                                                                                                                         aGCACTGGCTGCTGGGGTGTGTGTTATTCATAAAGCAAGGCTGTATGATCGTGAAATTAAAGATAGGCTATCGCCCATTACAAGAATGGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTTAGCAGGTGGCACAACTGGTAGaaa           <  1:496697/150‑1 (MQ=255)                                                                                                                                         aGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGaaa           <  2:405400/150‑1 (MQ=255)                                                                                                                                         aGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGaaa           <  1:32390/150‑1 (MQ=255)                                                                                                                                         aGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGaaa           <  2:570302/150‑1 (MQ=255)                                                                                                                                          gCACGGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAg          <  2:465117/150‑1 (MQ=255)                                                                                                                                                gctgctGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGG‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTag    >  1:16993/1‑149 (MQ=255)                                                                                                                                                gctgctGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTaa    <  1:125055/150‑1 (MQ=255)                                                                                                                                                 ctgctgGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAg   <  1:102942/150‑1 (MQ=255)                                                                                                                                                  tgctgGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGc  >  1:366721/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                      TCCTGTTATTATATTGTTTTCAGGTTTTTTTTGGCGCTCCTAATATATGGCTGATTTATAATTGTGAGTTTAATATTATGTTGACTCACTCATTGATCCAATACCTAACTTTACCAGCAACACCTCCGTCCCCAGTAGCACTGGCTGCTGGGGTGCGTTTTATTCATAAAGCAAGGCTGTATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGC‑CAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGC  >  NC_000913_3_pae_pgi/1425197‑1425491

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.