| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 1,731,621 | G→T | M845I (ATG→ATT) | lhr → | putative ATP‑dependent helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 1,731,621 | 0 | G | T | 98.8% | 275.8 / NA | 81 | M845I (ATG→ATT) | lhr | putative ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base T (49/30); total (50/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CATCGCACCCCGCTTTGGCAACAACGGCTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTGGCAGAGCGCCGGGCATCCGT > NC_000913_3_pae_pgi/1731475‑1731764 | cATCGCACCCCGCTTTGGCAACCCCGGCGGCGCTGC‑GGCAGAATGCTGAAAGTCACTCAGGGATATCCAGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCg < 1:368328/149‑1 (MQ=255)cATCGCACCCCGCTTTGGCAACAACGGCTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCCCTGGAACGTTTGATTCg > 1:1076824/1‑149 (MQ=255) tCGCACCCCGCTTTGGCAACAACGGCTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTc > 1:67770/1‑149 (MQ=255) gcccACCCAGCTTCGGCAACAACGGCTCCGCGCCAGTCAG‑GTGCCGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGCAACCCTACTCGAATGTCTGCAAGAGGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTc < 2:500128/146‑1 (MQ=255) gCACCCCGCTTTGGCAACAACGGCTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGc < 1:1061193/149‑1 (MQ=255) cccGCTTTGGCAACAACGGCTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTGTCGAAACCCTACGCGAATGTTGTTGTTAAGGGGAAGATCTTCCGGCACTTGGACGTTTGATTCGTCGCCTGa > 1:1570573/1‑149 (MQ=255) cGCTTTGGCAACAACGGCTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAAc > 1:424161/1‑149 (MQ=255) tttGGCAACAACGGCTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGt < 2:248604/149‑1 (MQ=255) caacaaCGGCTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATCCGTCGCCTGAACGGTGGCGa > 1:247972/1‑149 (MQ=255) aacaacGGCTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGaa > 2:510586/1‑149 (MQ=255) acaacGGCTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGaaa < 1:1433421/149‑1 (MQ=255) aacGGCTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAAtt > 2:482377/1‑149 (MQ=255) gcGGCCGAGCTCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGAATTTCCGGTCATTCTAGACACCCTACGCGAATGTCTGCCAGATGTTTATGACCTGCCCGCACTGGAACGTTTGATTCGTCGCCTAAGCGCTGGCGAAATTc < 2:1456662/148‑1 (MQ=255) ggCTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCaa < 1:198099/149‑1 (MQ=255) gCTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATCTCCGGAGTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCaaa < 1:1504839/149‑1 (MQ=255) gCTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCaaa > 2:1097219/1‑149 (MQ=255) gCTGCGCGCCAGGCAG‑TGGCTGGAAAGCGCTCAGGGATATCCGGATTTTCCGGTCATTCCCGAAACCCTACGCGAATGTCTGCAAGCTGTTTATTATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCaaa < 1:146578/149‑1 (MQ=255) cTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTACCGGCCGCGCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAat > 1:721643/1‑149 (MQ=255) tGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAata > 2:1205412/1‑149 (MQ=255) gcggCAGTCAG‑GTGCTGGAAATCGCTTAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATcc < 2:701280/149‑1 (MQ=255) gcCAGTCAG‑TGGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGCTCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGa < 1:863866/149‑1 (MQ=255) ccAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGAt < 1:263160/149‑1 (MQ=255) agtcag‑tTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGt < 1:1000413/149‑1 (MQ=255) g‑tTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGa > 1:266485/1‑149 (MQ=255) g‑tTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGa > 2:294496/1‑149 (MQ=255) cTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCAc > 2:1264224/1‑149 (MQ=255) gAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATTTACGGACCACTAc > 2:785721/1‑149 (MQ=255) gAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGATTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGGACGGTGGCGAAATTCAAATATACGGGGTCACGCCCACTAc > 2:35544/1‑149 (MQ=255) cGCTCAGGGTTAGCCTGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCt < 1:557038/149‑1 (MQ=255) gCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTc < 1:609031/149‑1 (MQ=255) aGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAACTATCCGATGTAACGACCACTACGCCCCCGcgt > 1:1514584/1‑147 (MQ=255) aGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTAATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCt > 2:180950/1‑149 (MQ=255) ccGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCATTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGCAATTCAAAGTTCCGATGTAACGACCACTACGCCCTCGCCTTTCGCcac < 2:1415231/149‑1 (MQ=255) ccGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCACGCCTTTcccccc > 2:1601818/1‑147 (MQ=255) cGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTCACGACCACTGCGCCCTCGCCTTTCGCcaca > 2:1542876/1‑149 (MQ=255) gATTTTCCGGTCATTCTCGAAACCCGACGCGTATGTCTACACGATGTTTATGATCTTCCCGCACTGCAACGTTTGATTCGTCGCCTGGACTGTGGCGAAATTCAAATATCCGATGTACCGACCACTACGCCCTCGCCTTTCGCCACCAg > 2:421336/1‑149 (MQ=255) ttCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAACTTCAAATATTCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTa < 2:1076824/149‑1 (MQ=255) ggTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTCCGCCCTCGCCTTTCGCCACAAGTTTATTGt > 2:502578/1‑149 (MQ=255) aTTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCgg > 2:131385/1‑149 (MQ=255) tctcGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCt > 1:1498335/1‑149 (MQ=255) tcGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCttt > 2:473660/1‑124 (MQ=255) tcGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCttt < 1:473660/124‑1 (MQ=255) cccTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACACCCTCCCCTTTCGCCACAAGTTTATTGTTCGGCTCTGTcggg > 1:851614/1‑147 (MQ=255) cTACGTGAATGTTTGCAAGATGTTTATGATTTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGa < 2:1570573/149‑1 (MQ=255) tACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGaa < 2:67770/149‑1 (MQ=255) cgAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTa < 1:482377/149‑1 (MQ=255) gAATGTCTGCAAGATGTTTATGATCTCCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTAt < 1:785721/149‑1 (MQ=255) cTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCa < 1:1205412/149‑1 (MQ=255) tGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGc < 1:732061/125‑1 (MQ=255) tGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGc > 2:732061/1‑125 (MQ=255) gCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCaga > 1:588989/1‑149 (MQ=255) cAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTTTTCGGCTATGTCGCGGAATTTATGTACGagag > 1:1050528/1‑149 (MQ=255) cAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCagag < 2:1498335/149‑1 (MQ=255) cAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCagag > 1:1558368/1‑149 (MQ=255) aaGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGc > 1:1150328/1‑149 (MQ=255) aGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGc < 2:1330636/43‑1 (MQ=255) aGATGTTTATGATCTTCCCGCACTGGAACGTTTGATTCGTCGc > 1:1330636/1‑43 (MQ=255) tATGATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGcccc > 2:91048/1‑149 (MQ=255) gATCTTCCGGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATGGTTCGGCTATGTCGCGGAATTTATTTACCAGAGCGGCGCCCCGCt > 2:217280/1‑149 (MQ=255) gATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGtt < 2:283685/100‑1 (MQ=255) gATCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGtt > 1:283685/1‑100 (MQ=255) gATCTTCCCGCACTGGAACGTTTGAATCGTCGCCTGAACGGTGGCGTAATTCAAATATCCGATGTAATGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAACTTATGTACCAGAGCGACGTCCCGCt > 1:1456319/1‑149 (MQ=255) tCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTgg < 1:860793/149‑1 (MQ=255) tCTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTgg > 1:973290/1‑149 (MQ=255) cTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGAc > 2:1521224/1‑68 (MQ=255) cTTCCCGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGAc < 1:1521224/68‑1 (MQ=255) cccGGACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTGGCaga < 2:1186480/149‑1 (MQ=255) ccGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGCTGTAACGACCACTACGCCCTCGCCTTTCGCCAAAAGTTTATTGTTCGGCTATGTCGCCGAATTTATGTACCAGAGCGACGACCCGCCGGCcgac > 1:703799/1‑148 (MQ=255) cGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACTAGAGCGACGCCCCGCTGGCAGAgc > 1:1100280/1‑149 (MQ=255) cGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTGGCAGGgc > 1:473859/1‑149 (MQ=255) cGCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTGGCAGAgc > 1:1067632/1‑149 (MQ=255) gCACTGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTGTTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTGGCAGAgcg > 1:1339223/1‑149 (MQ=255) gCACTGGAACGTTTGATTCGTCGCCTGAACGGTGACGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGACCGACGCCCCGCTGGCAGAgcg > 2:1275394/1‑149 (MQ=255) tGGAACGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTACCGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTGGCAGAGCGCCgg > 2:1580583/1‑149 (MQ=255) tGGAACGTTTGATGCCTCGCCTGAACGGGGGCGCAATGCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTGGCAGAGCGCCgg < 1:297325/149‑1 (MQ=255) gAACGTTTGATTCGTCGCCTGAACGGTGGCGAAACTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCTGAATTTATGTACCAGAGCGACGCCCCGCTGGCAGAGCGCCGGGc > 2:1278122/1‑149 (MQ=255) aaCGTTTGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTGGCAGAGCGCCGGGCa > 1:1264110/1‑149 (MQ=255) aCGTTTTATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTGGCAGAGCGCCGGGCAt > 1:205337/1‑149 (MQ=255) tttGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTGGCAGAGCGCCGGGCATCCg > 2:473743/1‑149 (MQ=255) tttGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTGGCAGAGCGCCGGGCATCCg > 1:1242210/1‑149 (MQ=255) ttGATTCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTGGCCTTTCGCCACAAGTTTATTGTTCGCCGATTTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTGGCAGAGCGCCGGGCATCCGt > 1:132787/1‑149 (MQ=255) | CATCGCACCCCGCTTTGGCAACAACGGCTGCGCGCCAGTCAG‑TTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTGGCAGAGCGCCGGGCATCCGT > NC_000913_3_pae_pgi/1731475‑1731764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |