| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_pgi | = 517451 | 79 (1.330) | 5 (0.090) | 5/266 | 7.4 | 6.2% | coding (829/855 nt) | ybbN | DnaK co‑chaperone, thioredoxin‑like protein |
| ? | NC_000913_3_pae_pgi | = 517463 | 77 (1.350) | coding (817/855 nt) | ybbN | DnaK co‑chaperone, thioredoxin‑like protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_pae_pgi/517302‑517451‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcgTCGAAGTATCGCCGCCAGCTGTATGCATTGTTGTATTGATATTCCGTTGATCGGCACATGAACCACAACGCCGGATGCGATGCTGCGCATCCGGCATCGCATCATTTCTTCTTCAATTGCGTCACCACCAACTGGTGGCGCGAATTAT < NC_000913_3_pae_pgi/517463‑517316 CTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTCAAGAAGAAATGATGGGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGC > 1:926930/1‑149CTATCGTAAGTTTTATAATTCGCGCCACAAAGTTGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGC > 1:785771/1‑149CTATCGGAAGGGTTATAATTCGCGCCAACAGTTGGTGGTGACGCAAGTGAAGAAGAAACGATGCGATGCCGGATGCGCAGCACCGCACCCGGCGTTGTGGTTCACGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGC < 2:495346/149‑1 TATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCG < 1:753578/149‑1 AATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACGGCTGGCGTCGAAGTATCGCCGC < 2:1023331/149‑1 TTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGTCGAAGTATCGCCGCCA > 1:456577/1‑149 TGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGTCGAAGTATCGCCGCCAGCTGTATGCATTGTTGTATT < 2:456577/149‑1 GCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGTCGAAGTATCGCCGCCAGCTGTATGCATTGTTGTAT < 1:509676/110‑1 GCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCGTCGAAGTATCGCCGCCAGCTGTATGCATTGTTGTAT > 2:509676/1‑110 TGGCGTCGAAGTATCGCCGCCAGCTGTATGCATTGTTGTATTGATATTCCGTTGATCGGCACATGAACCACAACGCCGGATGCGATGCTGCGCATCCGGCATCGCATCATTTCTTCTTCAATTGCGTCACCACCAACTGGTGGCGCGAA < 1:365929/149‑1 TGGCGTCGAAGTATCGCCGCCAGCTGTATGCATTGTTGTATTGATATTCCGTTGATCGGCACATGAACCACAACGCCGGATGCGATGCTGCGCATCCGGCATCGCATCATTTCTTCTTCAATTGCGTCACCACCAACTGGTGGCGCGAA < 2:764540/149‑1 GCGTCGAAGTATCGCCGCCAGCTGGATGCATTGTTGTATTGATATTCCGTTGATCGGCACATGAACCACAACGCCGGATGCGATGCTGCGCATCCGGCATCGCATCATTTCTTCTTCAATTGCGTCACCACCAACTGGTGGCGCGAATT < 2:422213/149‑1 GTCGAAGTATCGCCGCCAGCTGTATGCATTGTTGTATTGATATTCCGTTGATCGGCACATGAACCACAACGCCGGATGCGATGCTGCGCATCCGGCATCGCATCATTTCTTCTTCAATTGCGTCACCACCAACTGGTGGCGCGAATTAT > 1:199763/1‑149 CTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGATGCGATGCCGGATGCGCAGCATCGCATCCGGCGTTGTGGTTCATGTGCCGATCAACGGAATATCAATACAACAATGCATACAGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_pae_pgi/517302‑517451‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcgTCGAAGTATCGCCGCCAGCTGTATGCATTGTTGTATTGATATTCCGTTGATCGGCACATGAACCACAACGCCGGATGCGATGCTGCGCATCCGGCATCGCATCATTTCTTCTTCAATTGCGTCACCACCAACTGGTGGCGCGAATTAT < NC_000913_3_pae_pgi/517463‑517316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |