Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_pae_pgi	3423751–3424234	3424546–3424239	6–796	23 [22]	[20] 24	[rrfD]–[rrlD]	[rrfD],[rrlD]

CTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTG  >  NC_000913_3_pae_pgi/3424505‑3424695                                           |                                                                                                                                                     ctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa                                            >  1:553256/1‑149 (MQ=31)      ttACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCCCGCGACACTGTCCGCAACCCGGATTACGGGACAACGTTAGAACATCAAACATTAAAGGTTGGAATGTCAAGTTCTGCTCCACGCAAACTGGCGTCCCCGCTTCTAATCCt                                       >  2:465447/1‑149 (MQ=11)       tACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCACACTGGCGTCCACACTTCTAAGCCTc                                      >  2:990717/1‑149 (MQ=17)          tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGAGACCACACTTCTAAGCCTCCCa                                   >  1:21004/1‑149 (MQ=17)           ctgtgggaggaAAGCGCCCCACTCAAACTACCACCCAGACACTGTGCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACAGTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc                                  <  2:77094/144‑1 (MQ=11)           ctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc                                  <  2:808829/149‑1 (MQ=32)               aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGCATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTAt                              >  2:112736/1‑149 (MQ=17)                   ggcgaCCGCCCCAGTCAAACTACCCACCAGACACTGTCTGCAGCCCGGATTACGGGTCAACGTTAGAACATCAAACGTTAAAGGGAGGTATTTCAAGGTGGCCTGCATTCAGACTGGCGGCCACACTTCTACGCCTCCCAGCTACCCTa                          >  2:632856/4‑149 (MQ=11)                   ggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTa                          <  2:93988/149‑1 (MQ=32)                   ggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTAGTTCAAGGTCGGCTCCATGCAGACTTGCGTCCACACTTCTAAGCCTCTCAGCTATTCTa                          >  1:316473/1‑149 (MQ=11)                       aCCTCCACAGTTAAACTAACTACAGGACACTGTCCGCAACCCGGATTACGTGTCAACGTTAGGACACCAACCGTTAAAGGGTGGTATTTCAAGGTCGGCTCAATGCAGACTGGCCGCCACACTTCTAAGGCTCCCCCCCATCCTacaaa                      >  2:162027/1‑147 (MQ=11)                        ccGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACAt                     >  2:718214/1‑149 (MQ=32)                         cGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCGCCTATCCTACACATc                    >  2:654350/1‑149 (MQ=17)                            cccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCGTCCCACCTATCCTACACCTCAAg                 >  1:165440/1‑149 (MQ=17)                             ccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAgg                <  1:769076/149‑1 (MQ=32)                             ccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAgg                <  2:417358/149‑1 (MQ=32)                              cAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGc               <  1:685687/149‑1 (MQ=32)                                    aaCTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGCCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCACGACTCCATg         >  2:120330/1‑149 (MQ=255)                                       tACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTc      >  2:236536/1‑149 (MQ=32)                                          ccaccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt   <  1:290272/149‑1 (MQ=32)                                           caccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGt        >  2:865198/1‑143 (MQ=32)                                           caccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGt        <  1:865198/143‑1 (MQ=32)                                           caccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtg  <  2:553256/149‑1 (MQ=32)                                           caccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtg  <  2:907862/149‑1 (MQ=32)                                           |                                                                                                                                                     CTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTG  >  NC_000913_3_pae_pgi/3424505‑3424695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑