New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	19796 =	NA (NA)	6 (0.090)	4/276	NT	3.8%	noncoding (768/768 nt)	IS1	repeat region
	?	CP009273	3649844 =	150 (2.140)					coding (257/333 nt)	hdeA	stress response protein acid‑resistance protein

GGGAGATAGATTAGTTGTACATTACCACGATTTTGACTCGGCTCATTATTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCG  >  CP009273/19648‑19936                                                                                                                                                     |                                                                                                                                             gggAGATAGATTAGTTGGACATTACCACGATTTTGACTCGGCTCATTATTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTg                                                                                                                                              <  2:1219453/149‑1 (MQ=255)     gatagatTAGTTGTACATTACCACGATTTTGACTCGGCTCATTATTTGCGCGCATGAGAGATTGTTTCCATATGGACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGCCGAAATTGCCGGTaa                                                                                                                                          >  1:969691/1‑149 (MQ=255)     gatagatTAGTTGTACATTACCACGATTTTGACTCGGCTCATTATTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCAGGGGGATGCTGAAAAGAGTAGTAATTGCTGGTaa                                                                                                                                          >  1:150902/1‑149 (MQ=255)                    cATTACCACGATTTTGACTCGGCTCATTATTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTAtt                                                                                                                           >  2:505868/1‑149 (MQ=255)                         ccACGATTTTGACTCGGCTCATTATTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAg                                                                                                                      >  1:952710/1‑149 (MQ=255)                          cACGATTTTGACTCGGCTCATTATTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGCGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAgt                                                                                                                     >  2:279346/1‑149 (MQ=255)                          cACGATTTTGACTCGGCTCATTATTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTGTTGATAgt                                                                                                                     >  1:304550/1‑149 (MQ=255)                          cACGATTTTGACTCGGCTCATTATTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGCTAgg                                                                                                                     >  1:527030/1‑148 (MQ=255)                           aCGATTTTGACTCGGCTCATTATTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGCATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTGCAACTTATTGATAgtg                                                                                                                    >  2:337223/1‑149 (MQ=255)                             taTTTTTACTCGGCTCATTATTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGtt                                                                                                                  <  2:1197403/148‑1 (MQ=255)                               ttttGACTCGGCTCATTATTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGAGGCTGAAAAGAGTAGTAATTGCTGGTAAGGACTCCAACTTATTGCTAGGGtttt                                                                                                                >  1:373787/1‑149 (MQ=255)                                 ttGACTCGGCTCATTATTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTAt                                                                                                              >  1:615171/1‑149 (MQ=255)                                 ttGACTCGGCTCATTATTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCAGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTAt                                                                                                              <  2:159880/149‑1 (MQ=255)                                         ggtgattattTGCCCGCTTGAGAGATTGTTTCCATATGTACGCGGGCGAAGAAATAGAGGAATCTGGTTACATACTTAGTGGGGAGGGTGAACAGAGTAGTAATTGCTGGTAATGAACACAACTTATGGAGAGGGTTTCAGGGTCAgcg                                                                                                      >  2:637807/5‑147 (MQ=255)                                           tCATTATTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATaa                                                                                                    >  1:691995/1‑149 (MQ=255)                                            cATTATGTGCCCGGTTGCGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCAGGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATTACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAt                                                                                                   <  2:434701/149‑1 (MQ=39)                                              ttattTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTGATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGc                                                                                                 >  2:592664/1‑149 (MQ=255)                                              ttattTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCCACTTATTGATAGTGTTTTATGTTCAGATAATGc                                                                                                 >  2:1033460/1‑149 (MQ=255)                                               tattTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGcc                                                                                                >  2:691625/1‑149 (MQ=255)                                               tattTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGcc                                                                                                >  1:1193525/1‑149 (MQ=255)                                                attTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGccc                                                                                               <  1:1118394/149‑1 (MQ=255)                                                     cccGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGa                                                                                          <  1:306884/149‑1 (MQ=255)                                                         cTTGAGACATTGTTTCCAGATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACttt                                                                                      <  2:99254/149‑1 (MQ=255)                                                              gaCATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCAt                                                                                 >  2:120825/1‑149 (MQ=255)                                                              gaCATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTGCAGATAATGCCCGATGACTTTGTCAt                                                                                 >  2:976095/1‑149 (MQ=255)                                                                 gttGTTTCCATATGTACGAGGGCGAATAAATAGAGGAATCTGATTACTGCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCa                                                                              <  1:1062421/148‑1 (MQ=255)                                                                 aTTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATgat                                                                              >  2:614932/1‑147 (MQ=255)                                                                 aTTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCa                                                                              <  1:552524/149‑1 (MQ=255)                                                                    gttgctatatGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCt                                                                           <  1:949833/143‑1 (MQ=255)                                                                        ccagaggTACGCGGGCGAATAAATAGAGGGATCTGTTTACTTCCGTCATGGGGATGCTGAAAAGAGTAGTAATGGCTGGTAATGACGCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCAc                                                                       <  1:1178755/143‑1 (MQ=25)                                                                        ccATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCAc                                                                       <  2:1155031/149‑1 (MQ=255)                                                                        acctatGTACGCCGGCGAATAACTAGAGGAATCTGCTTATTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGATTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCAc                                                                       <  1:1029913/146‑1 (MQ=25)                                                                              gTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGAGGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATTCAACTCCACCGAttt                                                                 >  2:727858/1‑149 (MQ=255)                                                                                       cGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGCTTTTGAGAACGa                                                        >  2:736296/1‑149 (MQ=255)                                                                                        gAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGCACGAc                                                       >  1:223999/1‑149 (MQ=255)                                                                                           taaataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGc                                                    >  1:984933/1‑149 (MQ=255)                                                                                            aaataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAAGCACAGCg                                                   >  2:1196518/1‑149 (MQ=255)                                                                                            aaataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCg                                                   >  2:244448/1‑149 (MQ=255)                                                                                             aataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGa                                                  >  2:1010117/1‑149 (MQ=255)                                                                                              ataGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGAc                                                 <  1:637502/149‑1 (MQ=255)                                                                                                  agGAATTTGGTTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATTGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCTCCGATTTTGAGAACGACAGCGACTTcc                                             <  2:899915/149‑1 (MQ=255)                                                                                                  agGAATCTGTTTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTcc                                             <  1:50218/149‑1 (MQ=255)                                                                                                    gAATCTGATTACTTTCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGt                                           <  2:1081745/149‑1 (MQ=255)                                                                                                    gAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGt                                           >  1:789672/1‑149 (MQ=255)                                                                                                         tGATAACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACCTATTGACAGTGATTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAg                                      >  2:1043284/1‑149 (MQ=255)                                                                                                                ttccttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATCATGCCCGTTGACTTTGTCATGCAGATCCACCGATTTTGAGAACGGCAGGGACTTCCGTCCCCGCCGTccc                               >  2:102922/1‑149 (MQ=18)                                                                                                                ttccttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGcc                               >  1:617219/1‑149 (MQ=255)                                                                                                                ttccttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTACCAGCCGTGcc                               >  1:582811/1‑149 (MQ=255)                                                                                                                ttccttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTCCCGTCCCAGCCGTGcc                               >  2:892487/1‑149 (MQ=255)                                                                                                                    ttcATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGt                           >  1:507921/1‑149 (MQ=255)                                                                                                                       aTGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGtgct                        >  1:1033844/1‑149 (MQ=255)                                                                                                                         ggggtggCTAAAAAGAGTAGGATGTTCTGGTAATGACTCCAACTTAGTGATAGTGTTTTATGTTCGAATAATGCCCGAGTACTTTGTCACGCAGCTCCACCGATTTTGAGAACGACAGCGACCTCCGTCCCAGCCGTGCCATGtgctgg                      <  2:329941/143‑2 (MQ=11)                                                                                                                         ggggATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCCCCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGtgctgc                      <  1:855399/149‑1 (MQ=255)                                                                                                                         ggggATGCTGAAAAGAGTAGTAATTGCGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGtgctgc                      <  2:163581/149‑1 (MQ=255)                                                                                                                         ggggATGATTAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTTAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGtgctgc                      <  2:314310/149‑1 (MQ=255)                                                                                                                         ggacatgtcgAAATGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGCTAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGtgctgc                      <  2:852105/140‑1 (MQ=14)                                                                                                                                   gaaaTAGTAGTAATTGTTGGTAAGGACTTCAACTAATTGATAGTGTTTTATGTTCCGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCa            <  2:617655/148‑1 (MQ=11)                                                                                                                                   aaaaGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGAtccc            <  2:1140664/149‑4 (MQ=255)                                                                                                                                   aaaaGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCa            <  1:469002/149‑1 (MQ=255)                                                                                                                                    aaaGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAg           <  2:759684/149‑1 (MQ=255)                                                                                                                                        agtagtAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTa       <  2:691995/149‑1 (MQ=40)                                                                                                                                        agtagtAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTa       <  2:984933/149‑1 (MQ=40)                                                                                                                                          tagtaATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCCGGTGCTGCCTCAGATTCCGGTTATg     >  2:738768/1‑149 (MQ=255)                                                                                                                                           agtaATTGCTGGTAATGCCTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGc    <  1:592664/149‑1 (MQ=38)                                                                                                                                             taATTGCTGGTAATGACTCCAACTTGTTGGTAGTGTTTTATGTTCGGATCATGACGGATGACTTTGTCATGCAGCTCCACCGCTTTTGTATACGGAAGCGGCTCGCGTCCCGTCTGGGTTTGTTGGTGCCTTAGATGCAGGTTATGTCg  <  2:247577/149‑1 (MQ=2)                                                                                                                                             taAGTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCTATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCg  <  2:956524/149‑1 (MQ=18)                                                                                                                                                     |                                                                                                                                             GGGAGATAGATTAGTTGTACATTACCACGATTTTGACTCGGCTCATTATTTGCCCGCTTGAGACATTGTTTCCATATGTACGCGGGCGAATAAATAGAGGAATCTGATTACTTCCTTCATGGGGATGCTGAAAAGAGTAGTAATTGCTGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCG  >  CP009273/19648‑19936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.