mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 61 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4542690 | 179 (0.740) | 10 (0.040) | 6/260 | NT | 4.7% | intergenic (+57/‑425) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | = 4542986 | 234 (1.030) | intergenic (+353/‑129) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | 4393788 = | 223 (0.920) | 5 (0.020) | 3/260 | NT | 2.3% | coding (280/1140 nt) | queG | epoxyqueuosine reductase, cobalamine‑stimulated; queosine biosynthesis |
| ? | NC_000913 | 4393842 = | 221 (0.970) | coding (226/1140 nt) | queG | epoxyqueuosine reductase, cobalamine‑stimulated; queosine biosynthesis | |||||
| * | ? | NC_000913 | = 4341795 | 176 (0.720) | 3 (0.010) | 3/242 | NT | 1.7% | intergenic (‑167/‑116) | melR/melA | melibiose operon transcriptional regulator; autoregulator/alpha‑galactosidase, NAD(P)‑binding |
| ? | NC_000913 | = 4341815 | 186 (0.880) | intergenic (‑187/‑96) | melR/melA | melibiose operon transcriptional regulator; autoregulator/alpha‑galactosidase, NAD(P)‑binding | |||||
| * | ? | NC_000913 | 4341778 = | 174 (0.720) | 4 (0.020) | 3/242 | NT | 2.3% | intergenic (‑150/‑133) | melR/melA | melibiose operon transcriptional regulator; autoregulator/alpha‑galactosidase, NAD(P)‑binding |
| ? | NC_000913 | 4341834 = | 186 (0.880) | intergenic (‑206/‑77) | melR/melA | melibiose operon transcriptional regulator; autoregulator/alpha‑galactosidase, NAD(P)‑binding | |||||
| * | ? | NC_000913 | = 4175394 | 243 (1.000) | 3 (0.010) | 3/262 | NT | 1.4% | noncoding (7/76 nt) | thrU | tRNA‑Thr |
| ? | NC_000913 | = 4175452 | 206 (0.900) | noncoding (65/76 nt) | thrU | tRNA‑Thr | |||||
| * | ? | NC_000913 | = 4093097 | 210 (0.860) | 6 (0.030) | 4/266 | NT | 2.9% | intergenic (‑274/+27) | frvA/rhaM | putative enzyme IIA component of PTS/L‑rhamnose mutarotase |
| ? | NC_000913 | = 4093109 | 208 (0.890) | intergenic (‑286/+15) | frvA/rhaM | putative enzyme IIA component of PTS/L‑rhamnose mutarotase | |||||
| * | ? | NC_000913 | = 3998036 | 232 (0.950) | 3 (0.010) | 3/274 | NT | 1.4% | coding (54/2163 nt) | uvrD | DNA‑dependent ATPase I and helicase II |
| ? | NC_000913 | = 3998077 | 207 (0.860) | coding (95/2163 nt) | uvrD | DNA‑dependent ATPase I and helicase II | |||||
| * | ? | NC_000913 | 3886858 = | 448 (1.840) | 4 (0.020) | 3/266 | NT | 0.92% | coding (31/1365 nt) | mnmE | tRNA U34 5‑methylaminomethyl‑2‑thiouridine modification GTPase |
| ? | NC_000913 | 3886879 = | 435 (1.870) | coding (52/1365 nt) | mnmE | tRNA U34 5‑methylaminomethyl‑2‑thiouridine modification GTPase | |||||
| * | ? | NC_000913 | 3871752 = | 504 (2.070) | 4 (0.020) | 3/266 | NT | 0.84% | intergenic (‑22/+98) | dgoT/dgoD | D‑galactonate transporter/D‑galactonate dehydratase |
| ? | NC_000913 | 3871780 = | 460 (1.980) | intergenic (‑50/+70) | dgoT/dgoD | D‑galactonate transporter/D‑galactonate dehydratase | |||||
| * | ? | NC_000913 | 3868470 = | 587 (2.410) | 7 (0.030) | 3/270 | NT | 1.2% | coding (840/1248 nt) | yidR | DUF3748 family protein |
| ? | NC_000913 | 3868500 = | 584 (2.470) | coding (810/1248 nt) | yidR | DUF3748 family protein | |||||