New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 2872577136 (1.050)14 (0.120) 11/232 NT 9.6% intergenic (‑107/+14) rnpA/rpmH ribonuclease P/hypothetical protein
?CP000730 = 2872581 139 (1.180)intergenic (‑111/+10) rnpA/rpmH ribonuclease P/hypothetical protein

Only 100 of 202 total aligned reads displayed.

TCTTTTTAATTCGGTAAGCTTTTTCCAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGTTTATTTGGTTGATAAGTA  >  CP000730/2872437‑2872717
                                                                                                                                             |                                                                                                                                            
tCTTTTTAATTCGGTAAGCTTTTTCCAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGA                                                                                                                                              <  2:1272752‑M1/141‑1 (MQ=255)
 cTTTTTAATTCGGTAAGCTTTTTCCAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACtgat                                                                                                                                             >  1:11842/1‑141 (MQ=255)
 cTTTTTAATTCGGTAAGCTTTTTCCAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATCGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACtgat                                                                                                                                             >  1:143501/1‑141 (MQ=255)
  tttgctgatagataagctttttccaATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGAct                                                                                                                                            <  1:946384‑M1/129‑3 (MQ=255)
    tttAATTCGGTAAGCTTTTTCAAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAg                                                                                                                                          <  1:1469705/141‑1 (MQ=255)
     ttAATTCGGTAAGCTTTTTCCAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGActcat                                                                                                                                         <  1:682819‑M1/141‑6 (MQ=255)
     ttAATTCGGTAAGCTTTTTCCAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGt                                                                                                                                         >  1:1174167‑M2/1‑140 (MQ=255)
      tAATTCGGTAAGCTTTTTCCAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGtc                                                                                                                                        >  2:1567309‑M2/1‑139 (MQ=255)
      tAATTCGATATGCTTTTTACGATAAAATCTCTCGCCTATTAATTG‑TATTTATTTGAAGCTATATTTAATCTTTTATTGAGCTTATAACATAAATTTCTATTTATTATTAATTTAAACGAAAAAAAAGATCACTGATGAGtc                                                                                                                                        >  1:1307513‑M2/1‑139 (MQ=255)
       aaTTCGGTAAGCTTTTTCCAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGtca                                                                                                                                       <  1:262930‑M2/141‑4 (MQ=255)
           cGGTAAGCTTTTTCCAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGActcatcagtga                                                                                                                                   <  1:932992‑M1/141‑12 (MQ=255)
            ggTAAGCTTTTTCCAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGActcatcagtgat                                                                                                                                  <  1:161723‑M1/141‑13 (MQ=255)
             gTAAGCTTTTTCCAATAACATCACTCGCTTATTTATCGTTTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGActcatcagtgat                                                                                                                                  <  1:1323677‑M1/141‑13 (MQ=255)
                  cTTTTTCCAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATg                                                                                                                            <  1:55509/141‑1 (MQ=255)
                     tttCCAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAg                                                                                                                         >  2:1465644/1‑141 (MQ=255)
                      ttCCAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGa                                                                                                                        >  1:1482433/1‑141 (MQ=255)
                       tCCAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAACTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGACAGTGATCTTATGCAGAt                                                                                                                       >  2:572716/1‑141 (MQ=255)
                         cAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATaa                                                                                                                     >  2:1180505/1‑141 (MQ=255)
                         cAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATaa                                                                                                                     >  1:1144502/1‑141 (MQ=255)
                          aaTAACATCACTCGCTTATTTATCG‑TTTTTATTTCAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATaaa                                                                                                                    <  1:1538309/141‑1 (MQ=255)
                            tAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAAc                                                                                                                  >  1:1398010/1‑141 (MQ=255)
                                   aCTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAAATTTACgg                                                                                                           >  1:1123906/1‑141 (MQ=255)
                                        cTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCttt                                                                                                      <  1:1296289/141‑1 (MQ=255)
                                              tatCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTacgacg                                                                                                >  1:927470/1‑141 (MQ=255)
                                                 cG‑TTTTTATTGGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTacgacgacg                                                                                             <  2:239515/141‑1 (MQ=255)
                                                  g‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACgg                                                                                            >  1:511849/1‑141 (MQ=255)
                                                         aTTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCt                                                                                      >  1:963856/1‑141 (MQ=255)
                                                          tttGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTa                                                                                     >  2:1453195/1‑141 (MQ=255)
                                                           ttGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTaa                                                                                    <  1:625303/141‑1 (MQ=255)
                                                            tGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAAATTAAACGAAAACAAAGCTCACTGATGAGTCCGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTaaa                                                                                   <  1:992912/141‑1 (MQ=255)
                                                                gCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGAtgagtcagtgatcttttttttcgtttaaattaagaataaatagaaatttatgttataagctca                                                                               >  1:663142‑M1/1‑78 (MQ=255)
                                                                gCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACtt                                                                               >  1:165239/1‑141 (MQ=255)
                                                                   atatTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTAc                                                                            <  1:460888/141‑1 (MQ=255)
                                                                     ttttAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACgg                                                                          <  2:1215371/140‑1 (MQ=255)
                                                                     atTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGACGAGTCAGTGATCTTATCCAGCCAAAACTTTCCCGTCTTTACGCCGACGGCGCGCTAACACTCTACgg                                                                          <  2:413770/141‑1 (MQ=255)
                                                                      tttAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGc                                                                         >  2:448933/1‑141 (MQ=255)
                                                                        tAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCa                                                                       <  2:1144502/141‑1 (MQ=255)
                                                                         aaaCTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCAt                                                                      <  1:593897/141‑1 (MQ=255)
                                                                          aaCTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCAtt                                                                     >  1:1446679/1‑141 (MQ=255)
                                                                          aaCTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCAtt                                                                     >  2:624108/1‑141 (MQ=255)
                                                                           aCTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCAttt                                                                    <  1:1411852/141‑1 (MQ=255)
                                                                             ttCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCAttttt                                                                  <  1:1559246/141‑1 (MQ=255)
                                                                               cTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTtg                                                                >  2:1409611/1‑141 (MQ=255)
                                                                                  ttGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTac                                                                                                    >  2:1429303/1‑102 (MQ=255)
                                                                                  ttGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGc                                                             >  2:694353/1‑141 (MQ=255)
                                                                                      gCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGAtgagtcagtgatcttttttttcgtttaaattaagaataaatagaaatttatgttttaagctcaatagaagtttatatatagcttt                                                         >  2:1377776‑M1/1‑56 (MQ=255)
                                                                                      gCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCAt                                                         <  1:116959/141‑1 (MQ=255)
                                                                                      gCTTAGAACATAAATGTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCAt                                                         <  2:1091977/141‑1 (MQ=255)
                                                                                           taACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGAtgagtcagtgatcttttttttcgtttaaattaagaataaatagaaatttatgttataagctcaatagaagtttaaatatagcttcaaata                                                    >  1:755557‑M1/1‑51 (MQ=255)
                                                                                            aaCATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGttt                                                   <  1:288901/141‑1 (MQ=255)
                                                                                              cATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTc                                                 <  2:336216/141‑1 (MQ=255)
                                                                                              cATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTc                                                 <  1:306804/141‑1 (MQ=255)
                                                                                                   aTTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGaaa                                            <  2:1633508/141‑1 (MQ=255)
                                                                                                   aTTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTATGCTCATGCGTTTTCTGaaa                                            >  2:1220030/1‑141 (MQ=255)
                                                                                                       cTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCAt                                        >  2:940915/1‑141 (MQ=255)
                                                                                                       cTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCAt                                        <  1:448933/141‑1 (MQ=255)
                                                                                                        tatttattCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATg                                       <  1:408872/141‑1 (MQ=255)
                                                                                                        tatttattCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACAGCGCGCTAAAACTTTACGACCATTTTTTATGCTCATGCGTTTTCTGAAACCATg                                       >  2:484680/1‑141 (MQ=255)
                                                                                                         atttattCTTAATTTAAACGAAAAAAAAGATCACTGActcatcagt                                                                                                                                     >  1:1491915‑M1/1‑37 (MQ=255)
                                                                                                         atttattCTTAATTTAAACGAAAAAAAAGATCACTGActcatcagt                                                                                                                                     <  2:1491915‑M1/46‑10 (MQ=255)
                                                                                                          tttattCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGaa                                     <  2:1301825/141‑1 (MQ=255)
                                                                                                             attCTTAATTTAAACGAAAAAAAAGATCACTGAtgagtcagtgatcttttttttcgtttaaattaagaataaatagaaatttatgttataagctcaatagaagtttaaatatagcttaaaataaaaacgataaataagcga                                  >  1:1262269‑M1/1‑33 (MQ=255)
                                                                                                                cTTAATTTAAACGAAAAAAGAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTAc                               <  1:1590677/141‑1 (MQ=255)
                                                                                                                cTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTAc                               <  1:50826/141‑1 (MQ=255)
                                                                                                                cTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTCACGGCCTTTACGACGACGGCGCGCAACAACCCTCCGGCCATTTCTCGCGCACCTGCGCTCTCTGAACCCATGCACCTTAc                               >  2:1609165/1‑141 (MQ=255)
                                                                                                                 ttAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACt                              >  2:821482/1‑141 (MQ=255)
                                                                                                                  tAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTa                             <  2:1564243/141‑1 (MQ=255)
                                                                                                                   aaTTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTAt                            >  1:1080236/1‑141 (MQ=255)
                                                                                                                    aTTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATg                           >  2:727455/1‑141 (MQ=255)
                                                                                                                          aCGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACg                     >  1:101718/1‑141 (MQ=255)
                                                                                                                          aCGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACg                     <  2:686520/141‑1 (MQ=255)
                                                                                                                           ggAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAGACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCAATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGt                    <  2:348382/140‑1 (MQ=255)
                                                                                                                           cGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGt                    <  1:1501128/141‑1 (MQ=255)
                                                                                                                           cGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGt                    <  2:855771/141‑1 (MQ=255)
                                                                                                                            gAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGCAACCATGAACTTTACTATGTTTACGtt                   >  1:772442/1‑141 (MQ=255)
                                                                                                                            gAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGtt                   <  1:695410/141‑1 (MQ=255)
                                                                                                                             aaaaaaaaGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGttt                  <  1:670221/141‑1 (MQ=255)
                                                                                                                              aaaaaaaGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTANGTTTa                 >  1:438887/1‑141 (MQ=255)
                                                                                                                               aaaaaaGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGTTTAt                <  2:1540620/141‑1 (MQ=255)
                                                                                                                                 aaaaGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGTTTAttt              <  1:735429/141‑1 (MQ=255)
                                                                                                                                  aaaGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGTTTATTTg             >  2:101248/1‑141 (MQ=255)
                                                                                                                                   aaGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGTTTATTTgg            <  1:974376/141‑1 (MQ=255)
                                                                                                                                   aaGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGTTTATTTgg            >  2:859540/1‑141 (MQ=255)
                                                                                                                                   aaGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGTTTATTTgg            >  2:498481/1‑141 (MQ=255)
                                                                                                                                    aGATCACTGATGAGtcagtgatcttttttttcgtttaaattaagaataaatagaaatttatgttataagctcaatagaagtttaaatatagcttcaaataaaaacgataaataagcgagtgatgttattggaaaatgagaa           <  2:1306814‑M2/141‑128 (MQ=255)
                                                                                                                                     gATCACTGATGAGtcagtgatcttttttttcgtttaaattaagaataaatagaaatttatgttataagctcaatagaagtttaaatatagcttcaaataaaaacgataaataagcgagtgatgtatttggaaaaagcttac          <  1:207987‑M2/141‑129 (MQ=255)
                                                                                                                                      aTCACTGActcatcagtgatcttttttttcgtttaaattaagaataaatagaaatttatgttataagctcaatagaagtttaaatatagcttcaaataaaaacgataaataagcgagtgatgttattggaaaaagcttacc         <  2:408872‑M1/141‑134 (MQ=255)
                                                                                                                                       tCACTGActcatcagtgatcttttttttcgtttaaattaagaataaatagaaatttatgttataagctcaatagaagtttaaatatagcttcaaataaaaacgataaataagcgagtgatgttattggaaaaagcttaccg        >  2:1463439‑M1/1‑7 (MQ=255)
                                                                                                                                       tCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGTTTATTTGGTTGa        >  1:1220719/1‑141 (MQ=255)
                                                                                                                                       tCACAGATGAGacagcgatcttttttttcgcttaaattaagaataaatagaaatttatgttataagctcaatagaagtttaaatatagcttcaaataaaaacgaaaaataagcgagagatgtgattggaaaaagcttaccg        <  2:551570‑M2/141‑131 (MQ=255)
                                                                                                                                         aCTGActcatcagtgatctttttttttgtttaaattaagaataaatagaaatttatgttataagctcaatagaagtttaaatatagcttcaaataaaaacgataaataagcgagtgatgttattggaaaaagcttaccgaa      >  2:906808‑M1/1‑5 (MQ=255)
                                                                                                                                         aCTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGTTTATTTGGTTGATa      >  1:207426/1‑141 (MQ=255)
                                                                                                                                          cTGActcatcagtgatcttttttttcgtttaaattaagaataaatagaaatttatgttataagctcaatagaagtttaaatatagcttcaaataaaaacgataaataagctagtgatgttattggaaaaagcttaccgaat     <  2:1488764‑M1/141‑138 (MQ=255)
                                                                                                                                          cTGATGAGtcagtgatcttttttttcgtttaaattaagaataaatagaaatttatgttataagctcaatagaagtttaaatatagcttcaaataaaaacgataaataagcgagtgatgttattggaaaaagcttaccgaat     <  1:440662‑M2/141‑134 (MQ=255)
                                                                                                                                          cTGATGAGtcagtgatcttttttttcgtttaaattaagaataaatagaaatttatgttataagctcaatagaagtttaaatatagcttcaaataaaaacgataaataagcgagtgatgttattggaaaaagcttacagaat     <  1:1203273‑M2/141‑134 (MQ=255)
                                                                                                                                           tgatgaGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGTTTATTTGGTTGATAAg    <  2:78814/141‑1 (MQ=255)
                                                                                                                                            gatgaGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGTTTATTTGGTTGATAAGt   <  1:248897/141‑1 (MQ=255)
                                                                                                                                            gActcatcagtgatcttttttttcttttattttaagaataaatagaaatttatgttataatctcaatagaagtttaaatatagcttcaaataaaaacgataaataagcgagtgatgtaattgtaaaaagcttacctaattt   >  2:1120724‑M1/1‑2 (MQ=255)
                                                                                                                                             atgaGtcagtgatcttttttttcgtttaaattaagaataaatagaaatttatgttataagctcaatagaagtttaaatatagcttcaaataaaaacgataaataagcgagtgatgttattggaaaaagcttaccgaattaa  <  2:777132‑M2/141‑137 (MQ=255)
                                                                                                                                             atgaGtcagtgatcttttttttcgtttaaattaagaataaatagaaatttatgttataagctcaatagaagtttaaatatagcttcaaataaaaacgataaataagcgagtgatgttattggaaaaagcttaccgaattaa  <  1:609398‑M2/141‑137 (MQ=255)
                                                                                                                                             |                                                                                                                                            
TCTTTTTAATTCGGTAAGCTTTTTCCAATAACATCACTCGCTTATTTATCG‑TTTTTATTTGAAGCTATATTTAAACTTCTATTGAGCTTATAACATAAATTTCTATTTATTCTTAATTTAAACGAAAAAAAAGATCACTGATGAGTCAGTGATCTTATGCAGATAAAACTTTACGGCCTTTACGACGACGGCGCGCTAAAACTTTACGGCCATTTTTTGTGCTCATGCGTTTTCTGAAACCATGAACTTTACTATGTTTACGTTTATTTGGTTGATAAGTA  >  CP000730/2872437‑2872717

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.