New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2252589 =	88 (1.250)	9 (0.140)	7/252	8.3	9.8%	intergenic (+25/+127)	luxS/USA300HOU_2124	S‑ribosylhomocysteine lyase/hypothetical membrane protein
	?	CP000730	2252638 =	84 (1.270)					intergenic (+74/+78)	luxS/USA300HOU_2124	S‑ribosylhomocysteine lyase/hypothetical membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTA  >  CP000730/2252452‑2252728                                                                                                                                          |                                                                                                                                            aaGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGCATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGaaaa                                                                                                                                          <  2:294583/141‑1 (MQ=255) aaGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCTATTTAATCAGaaaa                                                                                                                                          <  2:631546/141‑1 (MQ=255)       aaTGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTc                                                                                                                                    >  2:234541/1‑141 (MQ=255)       aaTGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTc                                                                                                                                    >  2:227975/1‑141 (MQ=255)       aaTGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTc                                                                                                                                    >  2:522415/1‑141 (MQ=255)        aTGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCg                                                                                                                                   >  1:40422/1‑141 (MQ=255)         tgtgGCTGGGCAGCAAGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGa                                                                                                                                  <  1:24040/141‑1 (MQ=255)         tgtgGCTGGGCAGCAAGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGa                                                                                                                                  <  2:639042/141‑1 (MQ=255)          gtgGCTGGGCAGCAAGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGaa                                                                                                                                 >  1:595631/1‑141 (MQ=255)          gtgGCTGGGCAGCAAGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGaa                                                                                                                                 <  1:109631/141‑1 (MQ=255)                 ggCAGCAAGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGAt                                                                                                                          >  1:691664/1‑141 (MQ=255)                      ccaGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATCATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTAc                                                                                                                     >  2:403960/3‑141 (MQ=255)                      caAGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTAc                                                                                                                     >  1:5918/1‑141 (MQ=255)                      caAGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTAc                                                                                                                     >  2:391781/1‑141 (MQ=255)                        aGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACaa                                                                                                                   >  2:233622/1‑141 (MQ=255)                         gTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGGAAATAAATCTTAGTCACTCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAAt                                                                                                                  >  1:211401/1‑141 (MQ=255)                           cattcattAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCg                                                                                                                <  2:409477/141‑1 (MQ=255)                                    gAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTcc                                                                                                       <  1:361598/141‑1 (MQ=255)                                      aGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCaa                                                                                                     >  1:210247/1‑141 (MQ=255)                                      aGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCaa                                                                                                     >  1:588409/1‑141 (MQ=255)                                      aGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCaa                                                                                                     >  2:304420/1‑141 (MQ=255)                                       ggTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGACTTTACAATCGCCATTGTCCAAc                                                                                                    >  2:151736/1‑141 (MQ=255)                                              aaaCTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCtttt                                                                                             >  1:587672/1‑141 (MQ=255)                                              aaaCTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCtttt                                                                                             >  2:507287/1‑141 (MQ=255)                                               aaCTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGCTGTTTTCGGTACGGGACAATATATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCttttt                                                                                            <  1:381501/141‑1 (MQ=255)                                               aaCTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCttttt                                                                                            <  1:317340/141‑1 (MQ=255)                                                  tATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTttatt                                                                                         <  1:769715/141‑1 (MQ=255)                                                  tATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTttatt                                                                                         <  1:160086/141‑1 (MQ=255)                                                  tATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTttatt                                                                                         <  1:791853/141‑1 (MQ=255)                                                     cGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATg                                                                                      >  1:174140/1‑141 (MQ=255)                                                      gCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGc                                                                                     >  2:219064/1‑141 (MQ=255)                                                       cTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCt                                                                                    >  2:376863/1‑141 (MQ=255)                                                         cAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTGCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTc                                                                                  >  2:465008/1‑141 (MQ=255)                                                           aGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCaa                                                                                >  1:347577/1‑141 (MQ=255)                                                             cATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAg                                                                              <  1:109645/141‑1 (MQ=255)                                                               tttCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTc                                                                            >  1:59933/1‑141 (MQ=255)                                                                 tCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCaa                                                                          >  2:692744/1‑141 (MQ=255)                                                                 tCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAAACAGAAAAGCAGACGAACAATGATTTTACAATCGTCATTGTCCAACTGCTTTTTATTATGATTCAAAGTCaa                                                                          >  2:692849/1‑141 (MQ=255)                                                                   tAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCaaaa                                                                        >  1:223790/1‑141 (MQ=255)                                                                     gACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCaaaaaa                                                                      <  1:522415/141‑1 (MQ=255)                                                                     gACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCaaaaaa                                                                      >  1:13589/1‑141 (MQ=255)                                                                     gACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCaaaaaa                                                                      >  1:364369/1‑141 (MQ=255)                                                                      aCAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAAt                                                                     <  1:391781/141‑1 (MQ=255)                                                                          acgaaacgaaTGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGaa                                                                 <  2:595631/141‑1 (MQ=255)                                                                              tctataTGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACaaa                                                             >  2:324269/6‑141 (MQ=255)                                                                               acgaaTGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTCATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAAt                                                            >  1:430421/1‑141 (MQ=255)                                                                                 gaaTGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGa                                                          >  1:72145/1‑141 (MQ=255)                                                                                   aTGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCGATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGaaa                                                        >  2:170328/1‑141 (MQ=255)                                                                                   aTGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGaaa                                                        >  1:209213/1‑141 (MQ=255)                                                                                       cATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGt                                                    <  1:382282/141‑1 (MQ=255)                                                                                         tgatgTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGAAAAAAAAAAAAAAAATCGAACAAATGAAAAAGTaa                                                  <  2:542424/141‑1 (MQ=255)                                                                                           atgTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTAATATTGGGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTaaaa                                                >  1:222757/1‑141 (MQ=255)                                                                                                ttCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCttt                                           <  1:519231/141‑1 (MQ=255)                                                                                                ttCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCttt                                           >  2:441790/1‑141 (MQ=255)                                                                                                ttCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAAACttt                                           >  1:497680/1‑141 (MQ=255)                                                                                                 tCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTa                                          <  2:223790/141‑1 (MQ=255)                                                                                                 tCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTa                                          >  2:353826/1‑141 (MQ=255)                                                                                                 tCGGTAAAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAAAAAATAAAAAAGTAAAATCTTTa                                          <  2:656047/141‑1 (MQ=255)                                                                                                  cGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTaa                                         >  2:417620/1‑141 (MQ=255)                                                                                                  cGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTaa                                         >  1:186519/1‑141 (MQ=255)                                                                                                   ggTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAAc                                        >  2:332171/1‑141 (MQ=255)                                                                                                   ggTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAAc                                        >  1:527950/1‑141 (MQ=255)                                                                                                    gTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACa                                       <  2:301291/141‑1 (MQ=255)                                                                                                     tACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACAt                                      >  2:151432/1‑141 (MQ=255)                                                                                                       cAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGt                                                    >  1:100032/1‑125 (MQ=255)                                                                                                       cAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGt                                                    <  2:100032/125‑1 (MQ=255)                                                                                                         ggcaaataaatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGt                                  <  1:403960/138‑1 (MQ=255)                                                                                                             aataaatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGa                              <  1:507287/141‑1 (MQ=255)                                                                                                             aataaatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGa                              >  2:330077/1‑141 (MQ=255)                                                                                                             aataaatCTTAGTCAATCAAGCTAATCAGAAAAGCAGTCGAACAATGATTTTACAAACGCCATTGTCCAACTGCTTTTTATTATGCTTAAAAGAAAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGa                              <  2:211401/141‑1 (MQ=255)                                                                                                             aataaatCTTAGTCAATAAAGTTAATCCGAAACCCGGTCGAGCAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGa                              >  1:23181/1‑141 (MQ=255)                                                                                                                aaatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGattt                           <  1:417620/141‑1 (MQ=255)                                                                                                                 aatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGattta                          >  1:112087/1‑141 (MQ=255)                                                                                                                 aatCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGattta                          >  2:565985/1‑141 (MQ=255)                                                                                                                  atCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttat                         >  1:101719/1‑141 (MQ=255)                                                                                                                   tCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttatt                        >  2:526934/1‑141 (MQ=255)                                                                                                                            atcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCa               <  1:565985/141‑1 (MQ=255)                                                                                                                             tcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCAc              <  1:461884/141‑1 (MQ=255)                                                                                                                             acaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCAc              <  2:460591/140‑1 (MQ=255)                                                                                                                              caaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAGAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACt             <  2:771910/141‑1 (MQ=255)                                                                                                                                aGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACtat           >  1:179938/1‑141 (MQ=255)                                                                                                                                  ttAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATaa         <  1:219064/141‑1 (MQ=255)                                                                                                                                    aaTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAAtt       >  2:709716/1‑141 (MQ=255)                                                                                                                                      tCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTc     >  2:748309/1‑141 (MQ=255)                                                                                                                                      tCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTc     <  2:174140/141‑1 (MQ=255)                                                                                                                                        aGAAAAGTAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCtt   >  2:788851/1‑141 (MQ=255)                                                                                                                                        aGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCtt   >  1:198840/1‑141 (MQ=255)                                                                                                                                         gAAAAGCAGTCGAACAATGATTTTACAATCGCCATAGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTcctc  >  2:101768/1‑138 (MQ=255)                                                                                                                                          |                                                                                                                                            AAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTGCTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAAATCTTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTA  >  CP000730/2252452‑2252728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.