New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2317464	123 (1.130)	6 (0.070) +GCTCGGCACTAAAATGGTGTGCCGAGCT	6/212	12.4	5.7%	intergenic (+117/+1999)	rhbC/asp23	possible Iuc family aerobactin synthesis protein/alkaline shock protein 23
	?	CP000730	2319448 =	129 (1.180)					intergenic (+2101/+15)	rhbC/asp23	possible Iuc family aerobactin synthesis protein/alkaline shock protein 23
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AATCGTGAGCTCAAGGATTACATTAACTTATTAAATACAATCTATACAAATGAGAGAATAATACATTTTCCATATTCAAATTATTAAAAATCACAAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/2317365‑2317464 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTATCGAATAACTTATTGTAAACCTTGTCTTTCTTGGTTATTGTTTTCGTTATTTTTTTCGTGTTTTTGTTTCCACTCTTTTTGAGTCATTACATCGTCAACTTGCATGTTAACTTCAACTACATCTA  >  CP000730/2319448‑2319578                                                                                                     ||||||||||||||||||||||||||||                                                                                                                                    AATCGTGAGCTCAAGGATTACATTAACTTATTAAATACAATCTATACAAATGAGAGAATAATACATTTTCCATATTCAAATTATTAAAAATCACAAAAAAGCTCGGCACTAAAATGGTGTGCCGAGCTTTTTTATCGAATA                                                                                                                        >  1:160049/1‑141                           CTTATTAAATACAATCTATACAAATGAGAGAATAATACATTTTCCATATTCAAATTATTAAAAATCACAAAAAAGCTCGGCACTAAAATGGTGTGCCGAGCTTTTTTATCGAATAACTTATTGTAAACCTTGTCTTTCTTG                                                                                              <  2:434882/141‑1                               TTAAATACAATCTATACAAATGAGAGAATAATACATTTTCCATATTCAAATTATTAAAAATCACAAAAAAGCTCGGCACTAAAATGGTGTGCCGAGCTTTTTTATCGAATAACTTATTGTAAACCTTGTCTTTC                                                                                                 >  1:552607/1‑134                               TTAAATACAATCTATACAAATGAGAGAATAATACATTTTCCATATTCAAATTATTAAAAATCACAAAAAAGCTCGGCACTAAAATGGTGTGCCGAGCTTTTTTATCGAATAACTTATTGTAAACCTTGTCTTTC                                                                                                 <  2:552607/134‑1                                     ACAATCTATACAAATGAGAGAATAATACATTTTCCATATTCAAATTATTAAAAATCACAAAAAAGCTCGGCAC                                                                                                                                                        >  1:1064776/1‑73                                     ACAATCTATACAAATGAGAGAATAATACATTTTCCATATTCAAATTATTAAAAATCACAAAAAAGCTCGGCAC                                                                                                                                                        <  2:1064776/73‑1                                                          ATAATACATTTTCCATATTCAAATTATTAAAAATCACAAAAAAGCTCGGCACTAAAATGGTGTGCCGAGCTTTTTTATCGAATAACTTATTGTAAACCTTGTCTTTCTTGGTTATTGTTTTCATTATTTTTTTCGTGTTTT                                                               <  2:160049/141‑1                                                              TACATTTTCCATATTCAAATTATTAAAAATCACAAAAAAGCTCGGCACTAAAATGGTGTGCCGAGCTTTTTTATCGAATAACTTATTGTAAACCTTGTCTTTCTTGGTTATTGTTTTCATTATTTTTTTCGTGTTTTTGTT                                                           <  2:223616/141‑1                                                                                                                       GTGCCGAGCTTTTTTATCGAATAACTTATTGTAAACCTTGTCTTTCTTGGTTATTGTTTTCATTATTTTTTTCGTGTTTTTGTTTCCATTCTTTTTGAGTCATTACATCATCAACTTGCATGTTAACTTCAACAACATCTA  >  2:964000/1‑141                                                                                                     ||||||||||||||||||||||||||||                                                                                                                                    AATCGTGAGCTCAAGGATTACATTAACTTATTAAATACAATCTATACAAATGAGAGAATAATACATTTTCCATATTCAAATTATTAAAAATCACAAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/2317365‑2317464 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTATCGAATAACTTATTGTAAACCTTGTCTTTCTTGGTTATTGTTTTCGTTATTTTTTTCGTGTTTTTGTTTCCACTCTTTTTGAGTCATTACATCGTCAACTTGCATGTTAACTTCAACTACATCTA  >  CP000730/2319448‑2319578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.