BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1205383 =	105 (0.960)	79 (0.890) +TTCCTAGGGTGCCGTCTCAGCCTCG	8/218	11.5	57.0%	intergenic (+519/‑305)	yfiE/lspA	possible lactoylglutathione lyase/A8 family signal peptidase II
*	?	CP000730	1426741 =	42 (0.390)	79 (0.890) +TTCCTAGGGTGCCGTCTCAGCCTCG	8/218	11.5	57.0%	intergenic (‑472/+500)	pstS/yitL	phosphate ABC superfamily ATP binding cassette transporter, binding protein/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 108 total aligned reads displayed.

GTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAATTTTTAATGTCATCTTAAATAT  >  CP000730/1205244‑1205523

gTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAg                                                                                                                                             <  1:44807/141‑1 (MQ=255)

 ttAAGACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGAAACAACATAAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGc                                                                                                                                            <  2:880191/141‑1 (MQ=21)

   aaTACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGa                                                                                                                                          >  2:46639/1‑141 (MQ=255)

     tACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAg                                                                                                                                        <  1:1167582/141‑1 (MQ=255)

      actacgtaTTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGc                                                                                                                                       >  2:1121018/6‑141 (MQ=255)

      aCGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGc                                                                                                                                       <  2:164562/141‑1 (MQ=255)

       ctacgtaTTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGcc                                                                                                                                      >  1:940993/5‑141 (MQ=255)

         tagtaTTACTGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGCCATAGCGAAGCCAt                                                                                                                                    >  2:249465/1‑141 (MQ=255)

          agtaTTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCAtt                                                                                                                                   <  2:27610/141‑1 (MQ=255)

          agtaTTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCAtt                                                                                                                                   >  1:410842/1‑141 (MQ=255)

          agtaTTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCAtt                                                                                                                                   <  2:920153/141‑1 (MQ=255)

               tAATGGCGAGACTCCTNAGGGAGCAGTGCNAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATa                                                                                                                              >  1:908051/1‑141 (MQ=255)

                 aTGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACg                                                                                                                            >  1:989374/1‑141 (MQ=255)

                 aTGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACg                                                                                                                            <  2:55556/141‑1 (MQ=255)

                 aTGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACg                                                                                                                            <  2:530777/141‑1 (MQ=255)

                 aTGGCGAGACTCCAGAGAGAGCAGTGCTAGTCGAAGACAGAGGCTGAAAAGGCAACCTAGGAAGGGAACCATCATCAAAAATTCTATTTATAGAATTTTACAGTAAAGTACCAGATAGGCATACCGAAAACATTAAAAAca                                                                                                                            >  2:841075/1‑140 (MQ=17)

                  tGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGa                                                                                                                           <  1:74943/141‑1 (MQ=255)

                  tGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGa                                                                                                                           <  2:829146/141‑1 (MQ=255)

                    gCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATActtcg                                                                                                                         <  1:865312/141‑5 (MQ=255)

                     cGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGACATTCAATACGAAGt                                                                                                                        >  1:1153461/1‑141 (MQ=255)

                       agaCTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTAt                                                                                                                      >  1:515641/1‑141 (MQ=255)

                          cTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGt                                                                                                                   <  1:612594/141‑1 (MQ=255)

                          cTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGt                                                                                                                   <  1:987249/141‑1 (MQ=255)

                            ccTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGtat                                                                                                                 >  2:313822/1‑141 (MQ=255)

                               gAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATaaa                                                                                                              >  1:65481/1‑141 (MQ=255)

                                aGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAAt                                                                                                             <  2:785489/141‑1 (MQ=255)

                                aGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAAt                                                                                                             <  1:313822/141‑1 (MQ=255)

                                  ggAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATag                                                                                                           <  2:341650/141‑1 (MQ=255)

                                      cAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATagaaaa                                                                                                       >  1:248754/1‑138 (MQ=255)

                                      cAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGaa                                                                                                       >  2:937799/1‑141 (MQ=255)

                                      cAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGaa                                                                                                       >  1:318402/1‑141 (MQ=255)

                                      cAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGaa                                                                                                       <  2:1230749/141‑1 (MQ=255)

                                       aGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAAc                                                                                                      >  2:595928/1‑141 (MQ=255)

                                         tGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAAcgg                                                                                                    >  1:5447/1‑139 (MQ=255)

                                             aGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGt                                                                                                <  2:427301/141‑1 (MQ=255)

                                              gTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGa                                                                                                                           >  1:748012/1‑113 (MQ=255)

                                              gTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGa                                                                                                                           <  2:748012/113‑1 (MQ=255)

                                                  aaGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGAt                                                                                           <  1:664548/141‑1 (MQ=39)

                                                   aGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATa                                                                                          >  1:728839/1‑141 (MQ=38)

                                                     aCCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAAt                                                                                        <  1:732824/141‑1 (MQ=38)

                                                      ccGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAAtt                                                                                       <  1:3454/141‑1 (MQ=38)

                                                          ggCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTa                                                                                   <  2:1321451/141‑1 (MQ=38)

                                                          ggCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTa                                                                                   >  1:1035201/1‑141 (MQ=38)

                                                             tGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAAtt                                                                                >  2:48750/1‑141 (MQ=38)

                                                                gaCGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATa                                                                                                                              <  2:734337/92‑1 (MQ=34)

                                                                gaCGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATa                                                                                                                              >  1:734337/1‑92 (MQ=34)

                                                                gaCGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGTAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGa                                                                             >  1:595480/1‑141 (MQ=255)

                                                                gaCGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGa                                                                             >  1:933598/1‑141 (MQ=255)

                                                                 aCGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGaa                                                                            <  1:1008670/141‑1 (MQ=40)

                                                                 aCGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGaa                                                                            <  2:449297/141‑1 (MQ=255)

                                                                  cGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGaaa                                                                           <  1:1119158/141‑1 (MQ=255)

                                                                  cGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATAGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGaaa                                                                           >  1:13635/1‑141 (MQ=255)

                                                                    gCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAat                                                                         <  1:1053606/141‑1 (MQ=255)

                                                                    gCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAat                                                                         <  2:89090/141‑1 (MQ=255)

                                                                     cACCCTAGGAAGGGACCCGTCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGACGGGCAAAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTCAATTAGAAAata                                                                        <  1:225774/141‑1 (MQ=11)

                                                                      aCCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAatat                                                                       >  1:430241/1‑141 (MQ=255)

                                                                        ccTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCt                                                                     <  2:818156/141‑1 (MQ=255)

                                                                            ggAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTtact                                                                 >  1:701477/1‑141 (MQ=255)

                                                                            ggAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTtact                                                                 <  2:1062656/141‑1 (MQ=255)

                                                                               aGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACGGCAGTAAGATAATTTTTAATTAGAAAATATCTTactact                                                              <  2:5447/141‑1 (MQ=255)

                                                                                gggACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTg                                                             <  1:91964/141‑1 (MQ=255)

                                                                                 ggACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCACTACGAAGTATTGTATAAATAGAGCACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTgc                                                            >  2:953906/1‑140 (MQ=255)

                                                                                  gACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTc                                                           >  2:1315663/1‑141 (MQ=255)

                                                                                   atccgtcatcaAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGttc                                                          <  1:822832/136‑3 (MQ=255)

                                                                                      catcatCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCtttt                                                       >  1:1200392/1‑141 (MQ=255)

                                                                                           tcaAAAATTCTATTTATAGAATTTTACAGTAATGTGACAGACGGGCAAAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGttctctattta                                                  <  2:565668/141‑11 (MQ=11)

                                                                                              aaaaTTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGAtt                                               >  2:1198500/1‑141 (MQ=255)

                                                                                              aaaaTTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGAtt                                               <  1:742150/141‑1 (MQ=255)

                                                                                               aaaTTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGAttt                                              >  1:1340521/1‑141 (MQ=255)

                                                                                               aaaTTCTATAAATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGAttt                                              >  1:1220595/1‑141 (MQ=255)

                                                                                                 aTTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTAt                                            <  2:806982/141‑1 (MQ=255)

                                                                                                    ctataaataGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGtt                                         >  1:1345257/7‑141 (MQ=255)

                                                                                                    ctataaataGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATAACTTACTACTGTCTTTTTAGGGATTTATGtt                                         >  1:948540/7‑141 (MQ=255)

                                                                                                      ataaataGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTcc                                       >  1:699015/5‑141 (MQ=255)

                                                                                                       taaataGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTAATACTGTCTTTTTATGGATTTATGTTCCa                                      >  2:898811/4‑141 (MQ=255)

                                                                                                             gAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGc                                <  1:78222/141‑1 (MQ=255)

                                                                                                               gttttACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCtt                              <  2:1275383/140‑1 (MQ=255)

                                                                                                               aTTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCtt                              <  2:34554/141‑1 (MQ=255)

                                                                                                               aTTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCtt                              <  2:895686/141‑1 (MQ=255)

                                                                                                                ttttACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTACttt                             >  2:1105793/1‑141 (MQ=255)

                                                                                                                   tACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCt                          <  1:377970/141‑1 (MQ=255)

                                                                                                                   tACAATAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTAATACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCt                          >  2:270964/1‑141 (MQ=255)

                                                                                                                       gTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAAtt                      <  1:937799/141‑1 (MQ=255)

                                                                                                                       gTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAAtt                      >  1:1020920/1‑141 (MQ=255)

                                                                                                                       gTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAAtt                      <  1:519537/141‑1 (MQ=255)

                                                                                                                       gTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAAtt                      <  1:1054287/141‑1 (MQ=255)

                                                                                                                        tAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAAttt                     <  1:329615/141‑1 (MQ=255)

                                                                                                                         aaTGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAAtttt                    >  1:1074822/1‑141 (MQ=255)

                                                                                                                               ccAGATGGGCATAGCGAAGCCATTCAATACGAAGTCTTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAATTTTTAATGt              >  1:1210682/1‑141 (MQ=255)

                                                                                                                               ccAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAATTTTTAATGt              <  1:854723/141‑1 (MQ=255)

                                                                                                                               ccAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAATTTTTAATGt              >  1:540669/1‑141 (MQ=255)

                                                                                                                                 aGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAATTTTTAATGTCa            >  1:311847/1‑141 (MQ=255)

                                                                                                                                       ggaaaGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTCAAtt                                                                                >  1:1382346/5‑67 (MQ=11)

                                                                                                                                       ggaaaGCGAAGCCATTCAATACGAAGTACTGTATAAATAGAGAACAGCAGTAAGATAATTTTCAAtt                                                                                <  2:1382346/63‑1 (MQ=11)

                                                                                                                                         aTAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAATTTTTAATGTCATCTTAAat    <  1:1121018/141‑1 (MQ=255)

                                                                                                                                         aTAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAATTTTTAATGTCATCTTAAat    >  1:230477/1‑141 (MQ=255)

                                                                                                                                          tAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAATTTTTAATGTCATCTTAAata   >  2:1029162/1‑141 (MQ=255)

                                                                                                                                          tAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAATTTTTAATGTCATCTTAAata   >  1:24241/1‑141 (MQ=255)

                                                                                                                                          tAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAATTTTTAATGTCATCTTAAata   >  2:540347/1‑141 (MQ=255)

                                                                                                                                           aGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAATTTTTAATGTCATCTTAAatat  >  2:603776/1‑141 (MQ=255)

GTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACTGTCTTTTTAGGGATTTATGTTCCAGCCTGCTTTCCTAATTTTTAATGTCATCTTAAATAT  >  CP000730/1205244‑1205523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.