New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1205383 =	105 (0.960)	79 (0.890) +TTCCTAGGGTGCCGTCTCAGCCTCG	8/218	11.5	57.0%	intergenic (+519/‑305)	yfiE/lspA	possible lactoylglutathione lyase/A8 family signal peptidase II
	?	CP000730	1426741 =	42 (0.390)					intergenic (‑472/+500)	pstS/yitL	phosphate ABC superfamily ATP binding cassette transporter, binding protein/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

TGCCCGTCTGTCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGGGTCCCTTCCTAGGGTGCCGTCTCAGCCACCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAATCTATAGTCAT  >  CP000730/1426602‑1426877                                                                                                                                            |                                                                                                                                         tGCCCGTCTGTCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGGGTCCCTTCCTAGGGTGCCGTCTCAGCCACCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGt                                                                                                                                         >  1:1384887/1‑141 (MQ=35)   cccGTCTGTCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGGGTCCCTTCCTAGGGTGCCGTCTCAGCCACCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCt                                                                                                                                       <  1:758463/141‑1 (MQ=35)   cccGTCTGTCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGGGTCCCTTCCTAGGGTGCCGTCTCAGCCACCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCt                                                                                                                                       <  1:274009/141‑1 (MQ=35)   cccGTCTGTCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGGGTCCCTTCCTAGGGTGCCGTCTCAGCCACCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCt                                                                                                                                       <  1:1162307/141‑1 (MQ=35)     cGTCTGTCACATTACTGTAAAATTCTATAAATAGAATATTTGATGACGGGTCCCTTCCTAGGGTGCCGTCTCAGCCACCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTc                                                                                                                                     >  1:1007022/1‑141 (MQ=21)       tCTGTCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGGGTCCCTTCCTAGGGTGCCGTCTCAGCCACCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGa                                                                                                                                   >  2:821686/1‑141 (MQ=32)         tGTCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGGGTCCCTTCCTAGGGTGCCGTCTCAGCCACCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACt                                                                                                                                 <  1:1318048/141‑1 (MQ=32)                                                                        gtcgccgCCACCCCAACCGGCACATTGTTGTAAGCTGACTCTATGTGGGGTTGTGAGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATCAAAATGTAATTTTACTTTGaa                                                                  >  2:1059510/7‑141 (MQ=11)                                                                         tctcAGCCACCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGaaa                                                                 <  2:13686/141‑1 (MQ=32)                                                                         tctcAGCCACCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGaaa                                                                 <  1:796294/141‑1 (MQ=32)                                                                           tcAGCCACCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATa                                                               <  1:565668/141‑1 (MQ=32)                                                                             aGCCACCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACa                                                             <  1:837136/141‑1 (MQ=33)                                                                                cACCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTa                                                          >  2:875025/1‑141 (MQ=34)                                                                                cACCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTa                                                          <  1:1011951/141‑1 (MQ=35)                                                                                 aCCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTaa                                                         >  1:353932/1‑141 (MQ=35)                                                                                 aCCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTaa                                                         >  2:888778/1‑141 (MQ=34)                                                                                    ccAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGc                                                      >  1:1095907/1‑141 (MQ=37)                                                                                     cAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGcc                                                     <  2:550714/141‑1 (MQ=38)                                                                                      aaCCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTTGCACTGCTCCCTCAGGAGGCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGccc                                                    >  1:348642/1‑141 (MQ=255)                                                                                                ttgttgTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCa                                          <  1:630639/141‑1 (MQ=255)                                                                                                        aGCTGACTATATGTCAGCATCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCttt                                  >  2:207349/1‑141 (MQ=255)                                                                                                           tgacatatagTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTg                               >  2:104097/10‑141 (MQ=255)                                                                                                              cTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAAc                            >  1:840867/1‑141 (MQ=255)                                                                                                               tataTGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAAcc                           >  2:1231239/1‑141 (MQ=255)                                                                                                                  atGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGa                        >  2:1132776/1‑141 (MQ=255)                                                                                                                     gtcattgtataaagggggCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAAc                     <  2:1159332/127‑1 (MQ=255)                                                                                                                      cAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACg                    >  1:1121522/1‑141 (MQ=255)                                                                                                                      cAGCTTCTGTGTTGGGGCCCCTGTATTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACg                    <  2:835687/141‑1 (MQ=255)                                                                                                                         cTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCACTAAGGAGTAACGCAATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGACCAAATTAATCCAAAGCTTTCTTaaaaaaaaaaaaaa                 <  2:921311/141‑13 (MQ=17)                                                                                                                          ttCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGaaaa                <  1:1274778/141‑1 (MQ=255)                                                                                                                              gtgtTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGaaa                                                                 >  2:1276534/1‑88 (MQ=35)                                                                                                                              gtgtTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGaaa                                                                 <  1:1276534/88‑1 (MQ=35)                                                                                                                              gtgtTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAAt            >  2:324769/1‑141 (MQ=255)                                                                                                                              gtgtTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAAt            >  2:59992/1‑141 (MQ=255)                                                                                                                                gtTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAATCt          >  2:106017/1‑141 (MQ=255)                                                                                                                                 ttGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAATCta         >  1:1295730/1‑141 (MQ=255)                                                                                                                                   ggggCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCaa                                         >  1:428655/1‑107 (MQ=255)                                                                                                                                   ggggCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCaa                                         <  2:428655/107‑1 (MQ=255)                                                                                                                                     ggCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCa                                          <  2:159087/104‑1 (MQ=255)                                                                                                                                     ggCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCa                                          >  1:159087/1‑104 (MQ=255)                                                                                                                                      gCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAATCTATAGTc    >  2:860892/1‑141 (MQ=255)                                                                                                                                        cccTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAATCTATAGTCAt  >  2:788557/1‑141 (MQ=255)                                                                                                                                            |                                                                                                                                         TGCCCGTCTGTCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGGGTCCCTTCCTAGGGTGCCGTCTCAGCCACCCCAACCGGCACATTGTTGTAAGCTGACTATATGTCAGCTTCTGTGTTGGGGCCCCTGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTATTAACATGTAATTTTACTTTGAAATACATTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAATCTATAGTCAT  >  CP000730/1426602‑1426877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.