BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1878597 =	99 (0.910)	12 (0.130)	10/232	11.0	11.8%	intergenic (+56/+61)	ytfP/fmtB1	possible flavoprotein/cell surface anchored protein
*	?	CP000730	1878652 =	93 (0.990)	12 (0.130)	10/232	11.0	11.8%	intergenic (+111/+6)	ytfP/fmtB1	possible flavoprotein/cell surface anchored protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 109 total aligned reads displayed.

GGACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGAAGTTCTTTTTCAACTTTGCGCGA  >  CP000730/1878512‑1878789

ggACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTc                                                                                                                                           <  2:1061655/141‑1 (MQ=255)

 gACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTTTTTCTTATAAAAATGACCTTAATATAACTGAGTTACTAAAAAGTGTCGTTATATTAAGGTCATTTCg                                                                                                                                          >  2:563235/1‑141 (MQ=255)

 gACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCg                                                                                                                                          >  1:918068/1‑141 (MQ=255)

   cATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCNTTTCGtt                                                                                                                                        >  2:1041412/1‑141 (MQ=255)

   cATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGtt                                                                                                                                        <  1:584927/141‑1 (MQ=255)

    aTTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTa                                                                                                                                       >  1:208033/1‑141 (MQ=255)

        cTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTa                                                                                                                                   >  1:1336909/1‑141 (MQ=255)

         tCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTAt                                                                                                                                  >  1:141390/1‑141 (MQ=255)

           acaTGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGa                                                                                                                                <  2:550934/141‑1 (MQ=255)

               gCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTaaccagca                                                                                                                            >  1:419628/1‑134 (MQ=255)

               gCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCt                                                                                                                            <  1:1105560/141‑1 (MQ=255)

                cATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCtt                                                                                                                           <  2:859502/141‑1 (MQ=255)

                cATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCtt                                                                                                                           <  2:1137320/141‑1 (MQ=255)

                  tCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCTTTATATTAAGGTCATTTCGTTAATTATGATTCtttt                                                                                                                         <  1:1081699/141‑1 (MQ=255)

                  tCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCtttt                                                                                                                         >  1:481914/1‑141 (MQ=255)

                  tCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCtttt                                                                                                                         >  2:1005130/1‑141 (MQ=255)

                  tCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCtttt                                                                                                                         <  2:141586/141‑1 (MQ=255)

                  tCAATGGAAGAATAGTATAAAATTGGGTTCGATTCTCTTTAGTAGATCAACGTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCtttt                                                                                                                         <  1:819435/141‑1 (MQ=255)

                    aaTGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCtttt                                                                                                                         >  1:1279314/1‑139 (MQ=255)

                    aaTGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCtttt                                                                                                                         <  2:1279314/139‑1 (MQ=255)

                    aaTGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTc                                                                                                                       >  2:1184969/1‑141 (MQ=255)

                    aaTGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTc                                                                                                                       >  1:1063409/1‑141 (MQ=255)

                    aaTGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTc                                                                                                                       >  2:1050117/1‑141 (MQ=255)

                        gAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGttt                                                                                                                   >  1:357062/1‑141 (MQ=255)

                         aataatAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGtttc                                                                                                                  <  1:673764/141‑2 (MQ=255)

                          ataataGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCgttgtt                                                                                                                 >  2:752657/1‑141 (MQ=255)

                          ataataGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGttttt                                                                                                                 >  2:722228/1‑141 (MQ=255)

                           taataGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTa                                                                                                                >  2:1337294/1‑141 (MQ=255)

                             ataGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATCATGATTCTTTTTCGTTTTTAGt                                                                                                              >  1:1335246/1‑141 (MQ=255)

                                  ataAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGtc                                                                                                         >  2:125072/1‑141 (MQ=255)

                                   taAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGtct                                                                                                        <  1:398074/141‑1 (MQ=255)

                                   taAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGtct                                                                                                        <  2:674011/141‑1 (MQ=255)

                                   taAAATTTGGTTCGATTCTCTTTAGTAGATCAAATTTAAAATAAAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGtct                                                                                                        <  2:293300/141‑1 (MQ=255)

                                    aaaaTTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGtctt                                                                                                       >  1:370608/1‑141 (MQ=255)

                                       aTTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTa                                                                                                    <  1:569382/141‑1 (MQ=255)

                                        tttGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAg                                                                                                   <  2:423266/141‑1 (MQ=255)

                                          tGGTTCGATACTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCt                                                                                                 >  1:1223614/1‑141 (MQ=255)

                                                gATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACaaa                                                                                           <  2:1063409/141‑1 (MQ=255)

                                                    ctctTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCg                                                                                       >  1:527546/1‑141 (MQ=255)

                                                    ctctTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCg                                                                                       >  2:686918/1‑141 (MQ=255)

                                                      ctTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTATTCCGTCTCCTAGCTAACAAAGCCGCa                                                                                     >  2:686870/1‑141 (MQ=255)

                                                      ctTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCa                                                                                     >  2:1182140/1‑141 (MQ=255)

                                                      ctTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCa                                                                                     >  1:1157620/1‑141 (MQ=255)

                                                          agtagATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTg                                                                                 >  2:324233/1‑141 (MQ=255)

                                                                 cAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAg                                                                          >  1:289358/1‑141 (MQ=255)

                                                                  aaCTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGt                                                                         >  1:805090/1‑141 (MQ=255)

                                                                   aCTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTg                                                                        <  2:1250690/141‑1 (MQ=255)

                                                                    cTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGc                                                                       <  1:1268451/141‑1 (MQ=255)

                                                                     tttttCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACg                                                                                                           <  1:69912/104‑1 (MQ=255)

                                                                       tttCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCaaa                                                                    >  1:1081513/1‑141 (MQ=255)

                                                                        ttcattcaAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAAt                                                                   >  2:260217/1‑141 (MQ=255)

                                                                        ttcattcaAATAAAAATGACCTTAATATAAATAAGACACTAAAAAGTGTCGTTATATTAAGGGCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAAt                                                                   <  2:736850/141‑1 (MQ=255)

                                                                          cattcaAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTc                                                                 >  1:179655/1‑141 (MQ=255)

                                                                           attcaAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCt                                                                >  2:883479/1‑141 (MQ=255)

                                                                            ttcaAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGATAACAAAGCCGAACCTGTCATCAGTGCAAATTCtt                                                               >  1:281360/1‑141 (MQ=255)

                                                                              caAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTc                                                             <  2:984639/141‑1 (MQ=255)

                                                                                   aaaaaTGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATgg                                                        <  1:483945/141‑1 (MQ=255)

                                                                                   aaaaaTGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATgg                                                        <  2:289358/141‑1 (MQ=255)

                                                                                    aaaaTGACCTTAATATAACTGAGTCCCTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTACTCAGTGCAAATTCTTTCAATGGt                                                       >  1:205957/1‑141 (MQ=255)

                                                                                    aaaaTGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTTTTTTTTTTTTCTTCTTCTAGCTAACAAAGCCGCTTCTGTAATCAGTGCAAATTCTTTCAATGGt                                                       >  2:880362/1‑141 (MQ=255)

                                                                                        tGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAAt                                                   >  1:1106450/1‑141 (MQ=255)

                                                                                        tGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAAt                                                   >  1:41656/1‑141 (MQ=255)

                                                                                         gACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTTTTTTTTTTTTCTTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATc                                                  >  2:279754/1‑141 (MQ=255)

                                                                                         gACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCTCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATc                                                  <  1:1005130/141‑1 (MQ=255)

                                                                                         gACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCAAATCGTTAATTATGATTCTTTTTCGTTTTTAGTATGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATc                                                  >  1:154132/1‑141 (MQ=255)

                                                                                            cTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCAt                                               >  1:259254/1‑141 (MQ=255)

                                                                                            cTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCAt                                               >  2:360754/1‑141 (MQ=255)

                                                                                               aaTATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCCATGGTAAATCCATTcc                                            >  2:487382/1‑141 (MQ=255)

                                                                                                atatAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCt                                           <  2:1049901/141‑1 (MQ=255)

                                                                                                      cTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGaa                                     <  2:894092/141‑1 (MQ=255)

                                                                                                        gAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAAcc                                   <  1:429646/141‑1 (MQ=255)

                                                                                                        gAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAAcc                                   <  2:370608/141‑1 (MQ=255)

                                                                                                         aGTCACTAAACAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTCGTACCACTTCCACCTCAAAAAGGCGCACGTGTGCCTGCTGCAACTACTTCCGCTCGTAAATCCATTCCTTCCGCACCt                                  >  1:204765/1‑141 (MQ=255)

                                                                                                          gTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCCCCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTg                                 <  1:961282/141‑1 (MQ=255)

                                                                                                          gTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTg                                 <  2:1314456/141‑1 (MQ=255)

                                                                                                          gTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTg                                 <  2:218436/141‑1 (MQ=255)

                                                                                                             aCTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTAt                              >  1:74629/1‑141 (MQ=255)

                                                                                                               ttagtgactcagTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTAttt                            >  2:486669/12‑141 (MQ=255)

                                                                                                                   tgactcagTTATATTAATGGCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGaa                        >  1:1025929/8‑141 (MQ=255)

                                                                                                                     gtgtCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGAAGt                      <  2:962444/141‑1 (MQ=255)

                                                                                                                      tgtCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGAAGtt                     <  1:1144689/141‑1 (MQ=255)

                                                                                                                       gtCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGAAGTTc                    >  1:97417/1‑141 (MQ=255)

                                                                                                                       gtCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGAAGTTc                    >  1:1372268/1‑141 (MQ=255)

                                                                                                                        tCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAAt                                                          <  1:250176/102‑1 (MQ=255)

                                                                                                                        tCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAAt                                                          >  2:250176/1‑102 (MQ=255)

                                                                                                                        tCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGAAGTTCt                   >  1:1194080/1‑141 (MQ=255)

                                                                                                                        tCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGAAGTTCt                   >  1:1089087/1‑141 (MQ=255)

                                                                                                                           ttATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCTTTTTTATTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCGAATTCTTTCAATGGTAAATGCATTCCTTCAGAACCTGGATTTGGAAGTtttttt                >  2:1242378/1‑141 (MQ=255)

                                                                                                                             atatTAAGGTCATTTCGTTAATTATGATTC‑TTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGAAGTTCTTTTTCa             <  2:637123/141‑1 (MQ=255)

                                                                                                                                ttAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGAAGTTCTTTTTCAAc           <  2:683176/141‑1 (MQ=255)

                                                                                                                                 tAAGGTCATTTCGTTAATTATGATTCTTTTTCTTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCATTCAATGGTAAATCCATTCCTTCAGAAACTGTATTTGGAAGTTCTTTTTCAACt          >  2:1101124/1‑141 (MQ=255)

                                                                                                                                 tAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGa                         <  2:41313/126‑1 (MQ=255)

                                                                                                                                 tAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGa                         >  1:41313/1‑126 (MQ=255)

                                                                                                                                    ggTCATTTCGTTAATTATGATTCTTTTTTTTTTTTTTTTCGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAGTTCTTTCAATGGTAATTCCATTCCTTCAGAACCTGTATTTGGATGTTCTTTTTCAACtttt       >  2:1017221/1‑140 (MQ=255)

                                                                                                                                     gTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCCCCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCATAACCTGTATTTGGAAGTTCTTTTTCAACTTTgc      <  1:722228/141‑1 (MQ=255)

                                                                                                                                     gTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGAAGTTCTTTTTCAACTTTgc      <  2:129782/141‑1 (MQ=255)

                                                                                                                                      tCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAGATCCATTCCTTCAGAACCTGTATTTGGAAGTTCTTTTTCAACTTTgcg     <  2:1329787/141‑1 (MQ=255)

                                                                                                                                       cATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGAAGTTCTTTTTCAACTTTgcgc    <  2:645531/141‑1 (MQ=255)

                                                                                                                                        aTTTCGTTAATTATGATTCTTTTTTTTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGAAGTTCTTTTTCAACTTTgctct   >  2:909421/1‑138 (MQ=255)

                                                                                                                                         tttCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGAAGTTCTTTTTCAACTTTGCGCGa  <  2:918068/141‑1 (MQ=255)

GGACATTACTCACATGCATCAATGGAATAATAGTATAAAATTTGGTTCGATTCTCTTTAGTAGATCAACTTTTTCATTCAAATAAAAATGACCTTAATATAACTGAGTCACTAAAAAGTGTCGTTATATTAAGGTCATTTCGTTAATTATGATTCTTTTTCGTTTTTAGTACGTCTTCTAGCTAACAAAGCCGCACCTGTAATCAGTGCAAATTCTTTCAATGGTAAATCCATTCCTTCAGAACCTGTATTTGGAAGTTCTTTTTCAACTTTGCGCGA  >  CP000730/1878512‑1878789

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.