New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 826356	28 (0.820)	3 (0.100)	3/246	5.0	11.2%	intergenic (+92/+78)	tagO/yvyE	hypothetical membrane protein/hypothetical membrane protein
	?	CP000730	= 826419	22 (0.710)					intergenic (+155/+15)	tagO/yvyE	hypothetical membrane protein/hypothetical membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCTGTATGGGATAATTTGTATTATATGGCTTTACTCTTTACAATTTTTTTGTATTAAATTTCAAATATAAAAAGCACTGCCATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCTTTTTATTTTTATTCAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTCTTCAGTCAAATCGAAATTTCCTGCAGTCATTTGATTTAAAAAGTTAATAAACGCTTCATAGTCACTTTTAACGACATCG  >  CP000730/826279‑826554                                                                                                                                             |                                                                                                                                        gCTGTATGGGATAATTTGTATTATATGGCTTTACTCTTTACAA‑TTTTTTGTATTAAATTTCAAATATAAAAAGCACTGCCATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATa                                                                                                                                        >  1:375736/1‑141 (MQ=255) gCTGTATGGGATAATTTGTATTATATGGCTTTACTCTTTACAA‑TTTTTTGTATTAAATTTCAAATATAAAAAGCACTGCCATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATa                                                                                                                                        >  1:375743/1‑141 (MQ=255)         ggATAATTTGTATTATATGGCTTTACTCTTTACAATTTTTTTGTATTAAATTTCAAATATAAAAAGCACTGCCATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCttt                                                                                                                                 <  2:286941/141‑1 (MQ=255)                   tattatATGGCTTTACTCTTTACAATTTTTTTGTATTAAATTTCAAATATAAAAAGCACTGCCATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCTttttatttttat                                                                                                                       <  1:198340/141‑1 (MQ=255)                   tattatATGGCTTTACTCTTTACAATTTTTTTGTATTAAATTTCAAATATAAAAAGCACTGCCATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCTttttatttttat                                                                                                                       >  1:118743/1‑141 (MQ=255)                           ggCTTTACTCTTTACAATTTTTTTGTATTAAATTTCAAATATAAAAAGCACTGCCATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCTTTTTATTTTTATTCAGTTgg                                                                                                               <  2:186447/141‑1 (MQ=255)                            gCTTTACTCTTTACAATTTTTTTGTATTAAATTTCAAATATAAAAAGCACTGCCATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCTTTTTATTTTTATTCAGTTGGt                                                                                                              >  1:19031/1‑141 (MQ=255)                             cTTTACTCTTTACAATTTTTTTGTATTAAATTTCAAATATAAAAAGCACTGCCATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCTTTTTATTTTTATTCAGTTGGta                                                                                                             <  1:116502/141‑1 (MQ=255)                                 aCTCTTTACAATTTTTTTGTATTAAATTTCAAATATAAAAAGCACTGCCATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCTTTTTATTTTTATTCAGTTGGTATATc                                                                                                         >  1:218343/1‑141 (MQ=255)                                               ttttGTATTAAATTTCAAATATAAAAAGCACTGCCATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCTTTTTCTTTTTATTCAGTTGGTATATCGAAAGGTAACTGCt                                                                                           >  2:184789/1‑141 (MQ=255)                                                               aaaTATAAAAAGCACTGCCATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCTTTTTATTTTTATTCAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTCTTCAGt                                                                           <  2:110387/141‑1 (MQ=255)                                                                       aaaGCACTGCCATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCTTTTTATTTTTATTCAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTCTTCAGTCAAATCGa                                                                   <  1:353183/141‑1 (MQ=255)                                                                         aGCACTGCCATAAACGTGTACTTCAATTGTCGTTTAACACTACCCAATTGATATTTACCGTCTTATGATAGTGCTTTTTATTTTCATTCAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTCTTCAGTCAAATCGaaa                                                                 <  2:76594/141‑1 (MQ=255)                                                                              tGCCATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTAACCGACTTATGATAGGGCTTTTTATTTTTATTAAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTATTCAGTCAAATCGAAATTTcc                                                            >  1:290146/1‑141 (MQ=255)                                                                                ccATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGTTAGTGCTTTTTATTTTTATTCAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTCTTCAGTCAAATCGAAATTTCCTg                                                          >  2:375679/1‑141 (MQ=255)                                                                                ccATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCTTTTTATTTTTATTTAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTCTTCAGTCAAATCGAAATTTCCTg                                                          >  2:41413/1‑141 (MQ=255)                                                                                   tAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCTTTTTATTTTTATTCAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTCTTCAGTCAAATCGAAATTTCCTGCAg                                                       <  2:284950/141‑1 (MQ=255)                                                                                      aCGTGTACTTCAATTGTCGTTTAATAATACGGAATTTATATTTACCGTCTTATGATAGTGCTTTTTATTTTTATTCAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTCTTCAGTCAAATCGAAATTTCCTGCAGTCa                                                    <  2:384978/141‑1 (MQ=255)                                                                                          gtACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGTTAGTGCTTTTTATTTTTATTCAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTCTTCAGTCAAATCGAAATTTCCTGCAGTCATTTg                                                <  1:375679/141‑1 (MQ=255)                                                                                                    tGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCTTTTTATTTTTATTCAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTCTTCAGTCAAATCGAAATTTCCTGCAGTCATTTGATTTAAAAAg                                      <  1:144436/141‑1 (MQ=255)                                                                                                       cGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCTTTTTATTTTTATTAAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTCTTCAGTCAAATCGAAATTTCCTGCAGTCATTTGATTTAAAAAGTta                                   >  1:113388/1‑141 (MQ=255)                                                                                                                       gttGATATTTAACGACTTATGATACTGCTTTTTATTTTTATTCAGTTGCTATATCGAAAGGTAACTGGTCTGTAGTTTCTTCAGTCAAATTGATATTTCCTGCAGTCTGTTGATTTAAAAAGTTAATAAACGCTTCATAGt                   <  1:128878/140‑1 (MQ=255)                                                                                                                             atTTACCGTCTTATGATAGTGCTTTTTATTTTTATTCAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTCTTCAGTCAAATCGAAATTTCCTGCAGTCATTTGATTTAAAAAGTTAATAAACGCTTCATAGTCACttt             >  2:95864/1‑141 (MQ=255)                                                                                                                                    gTCTTATGATAGTGCTTTTTATTTTTATTCAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTCTTCAGTCAAATCGAAATTTCCTGCAGTCATTTGATTTAAAAAGTTAATAAACGCTTCATAGTCACTTTTAACGAc      <  1:43390/141‑1 (MQ=255)                                                                                                                                        tATGATAGTGCTTTTTATTTTTATTCAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTCTTCAGTCAAATCGAAATTTCCTGCAGTCATTTGATTTAAAAAGTTAATAAACGCTTCATAGTCACTTTTAACGACATCg  <  1:243294/141‑1 (MQ=255)                                                                                                                                             |                                                                                                                                        GCTGTATGGGATAATTTGTATTATATGGCTTTACTCTTTACAATTTTTTTGTATTAAATTTCAAATATAAAAAGCACTGCCATAAACGTGTACTTCAATTGTCGTTTAATAATACGCAATTGATATTTACCGTCTTATGATAGTGCTTTTTATTTTTATTCAGTTGGTATATCGAAAGGTAACTGCTTTGGAGTTTCTTCAGTCAAATCGAAATTTCCTGCAGTCATTTGATTTAAAAAGTTAATAAACGCTTCATAGTCACTTTTAACGACATCG  >  CP000730/826279‑826554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.