New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 263636665 (0.730)3 (0.040) 3/236 NT 4.5% intergenic (‑419/+50) fnbA/gntP fibronectin‑binding protein A/GntP family gluconate:proton (H+) symporter
?CP000730 = 2636392 69 (0.850)intergenic (‑445/+24) fnbA/gntP fibronectin‑binding protein A/GntP family gluconate:proton (H+) symporter
Rejected: Frequency below/above cutoff threshold.

Only 100 of 111 total aligned reads displayed.

TTTCATAATTATCGCCTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGTTTCTTTT  >  CP000730/2636226‑2636506
                                                                                                                                            |                                                                                                                                            
tttCATAATTATCGCCTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTT                                                                                                                                              <  1:247137‑M1/141‑1 (MQ=255)
 ttCATAATTATCGCCTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTc                                                                                                                                             >  1:391712/1‑141 (MQ=255)
 ttCATAATTATCGCCTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTc                                                                                                                                             >  2:1073404/1‑141 (MQ=255)
  tCATAATTATCGCCTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCa                                                                                                                                            >  1:330176/1‑141 (MQ=255)
   cATAAATATCGCCTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAACAATAAACGNTTTTCaa                                                                                                                                           >  2:815810/1‑141 (MQ=255)
    aTAATTATCGCCTGTACAATACGCACAAAAACATTTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAg                                                                                                                                          <  1:1007303/141‑1 (MQ=255)
         tATCGCCTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAat                                                                                                                                     >  1:5277/1‑141 (MQ=255)
           tCGCCTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAatat                                                                                                                                   <  2:564221/141‑1 (MQ=255)
               cTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTg                                                                                                                               >  1:672866/1‑141 (MQ=255)
                 gTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCa                                                                                                                             <  2:567031/141‑1 (MQ=255)
                 gTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCa                                                                                                                             >  1:991371/1‑141 (MQ=255)
                       tACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGCGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTAcc                                                                                                                       >  2:571898/1‑141 (MQ=255)
                           cacaAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAa                                                                                                                   <  2:904960‑M2/141‑2 (MQ=255)
                           cacaAAAACATGTCTTGAAACGACTATTATTACTCTAAAATACCCAATATACTTTTTATGTCTTTTTGATTCTGATGATTGGAGACGAGTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATAGTGTAATTAcaaaaa                                                                                                                   >  2:763441/1‑136 (MQ=255)
                            acaAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAaa                                                                                                                  <  2:611945‑M2/141‑3 (MQ=255)
                            aaagaaacattcttaacatggtcattattagaaacgattatttccgtttcaggtatcatcttcattttattcattagcttatttgtttaactaaatattaagTAAACGTGTTTCAAGGCAATATATTGCAATTACCTaaaa                                                                                                                  >  1:543607‑M1/103‑141 (MQ=255)
                             caAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAaaa                                                                                                                 <  2:564317‑M2/141‑4 (MQ=255)
                             caAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAaaa                                                                                                                 <  2:564392‑M2/141‑4 (MQ=255)
                             aaaaaacATGTCTTGAAACGCCTTTCATAACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAaaa                                                                                                                 >  2:1043033‑M2/2‑138 (MQ=255)
                              aaaaaCATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAaaac                                                                                                                >  2:424759‑M2/1‑137 (MQ=255)
                               aaaaCATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAaaaca                                                                                                               <  1:441353‑M2/141‑6 (MQ=255)
                               aaaaCATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAaaaca                                                                                                               <  1:133998‑M2/141‑6 (MQ=255)
                                aaaCATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAaaacac                                                                                                              <  2:83458‑M2/141‑7 (MQ=255)
                                 aaCATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTttaggtaattgcaatatattgccttgaaacacg                                                                                                             <  2:187891‑M1/141‑34 (MQ=255)
                                   cATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAaaacacgtt                                                                                                           <  2:6068‑M2/141‑10 (MQ=255)
                                     tGTCTTGAAACGCCTTTCATCACTCTAACATCCCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTttaggtaattgcaatatattgccttgaaacacgttta                                                                                                         <  2:1084095‑M1/141‑38 (MQ=255)
                                       tCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACt                                                                                                       >  1:498010/1‑141 (MQ=255)
                                       cttaacatggtcattattagaaacgattatttccgtttcaggtatcatcttcattttattcattagcttatttgtttaactaaatattaagTAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACt                                                                                                       >  2:137414‑M1/92‑141 (MQ=255)
                                        ttaacatggtcattattagagacgattatttccgtttcaggtatcatcttcattttattcattagcttatttgtttaactaaatattaagTAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACtt                                                                                                      >  1:582230‑M1/91‑141 (MQ=255)
                                        cTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACtt                                                                                                      <  2:442876/141‑1 (MQ=255)
                                        cTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACtt                                                                                                      <  1:357694/141‑1 (MQ=255)
                                           gAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAat                                                                                                   >  1:875284/1‑141 (MQ=255)
                                             aaCGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAatat                                                                                                 <  2:416784/141‑1 (MQ=255)
                                                gCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTa                                                                                              >  1:818782/1‑141 (MQ=255)
                                                 ccTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAg                                                                                             >  1:491531/1‑141 (MQ=255)
                                                  cTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAaaacacgtttatttttctgcataa                                                                                            <  1:50938‑M2/141‑25 (MQ=255)
                                                  cTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGt                                                                                            >  1:129719/1‑141 (MQ=255)
                                                    ttCATCACTCTAAAATACCCAATATACTTTTTATATCTTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAACGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTa                                                                                          <  2:1053301/141‑1 (MQ=255)
                                                    ttCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTa                                                                                          <  1:815810/141‑1 (MQ=255)
                                                    ttCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTa                                                                                          >  1:930721/1‑141 (MQ=255)
                                                      catcaCTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTAGCTAAAAACACGTTTACTTAATATTTAGTTaaa                                                                                        >  2:457463/1‑141 (MQ=255)
                                                      catcaCTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTaaa                                                                                        >  1:1010828/1‑141 (MQ=255)
                                                       atcaCTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTaaaa                                                                                       >  2:824569/1‑140 (MQ=255)
                                                        tcaCTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACa                                                                                      <  1:540701/141‑1 (MQ=255)
                                                         caCTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACaa                                                                                     <  2:321257/141‑1 (MQ=255)
                                                          aCTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACaaa                                                                                    >  2:450898/1‑141 (MQ=255)
                                                              tAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAg                                                                                <  1:257953/141‑1 (MQ=255)
                                                                     cccAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATCAGCTAATGa                                                                         >  2:400974/1‑141 (MQ=255)
                                                                     cccAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGa                                                                         >  1:1072294/1‑141 (MQ=255)
                                                                     cccAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGa                                                                         >  1:296113/1‑141 (MQ=255)
                                                                       cAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAAt                                                                       >  1:612542/1‑141 (MQ=255)
                                                                       cAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAAt                                                                       <  2:227718/141‑1 (MQ=255)
                                                                       aaaTAAACTTTTTATATCGTTCGGAATCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATAAAAAAAAAAAAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAAt                                                                       <  2:644489/140‑1 (MQ=255)
                                                                            taCTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAAt                                                                  <  1:324305/141‑1 (MQ=255)
                                                                                    atatCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAgatga                                                          <  1:846559/141‑1 (MQ=255)
                                                                                    atatCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAgatga                                                          <  2:596398/141‑1 (MQ=255)
                                                                                     tatCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAgatgat                                                         <  1:420944/141‑1 (MQ=255)
                                                                                       tCGTTCGGATTCTGATTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATAc                                                       <  1:332849/141‑1 (MQ=255)
                                                                                        cGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATAcc                                                      >  2:1054215/1‑141 (MQ=255)
                                                                                           tCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGa                                                   >  1:717647/1‑141 (MQ=255)
                                                                                            cGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGaa                                                  <  1:311595/141‑1 (MQ=255)
                                                                                             ggATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGaaa                                                 >  1:504771/1‑141 (MQ=255)
                                                                                                 tCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGa                                             <  2:330176/141‑1 (MQ=255)
                                                                                                  cTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGaa                                            >  1:165151/1‑141 (MQ=255)
                                                                                                  cTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGaa                                            >  2:24442/1‑141 (MQ=255)
                                                                                                   tGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGaaa                                           <  2:596193/141‑1 (MQ=255)
                                                                                                   tGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGaaa                                           <  2:42465/141‑1 (MQ=255)
                                                                                                    gAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAaat                                          <  2:223785/141‑1 (MQ=255)
                                                                                                      gTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAaataa                                        <  1:446272/141‑1 (MQ=255)
                                                                                                      gTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAaataa                                        >  1:1055937/1‑141 (MQ=255)
                                                                                                       tATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACgattatttc                                       <  2:280070/141‑9 (MQ=255)
                                                                                                       tATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAaataat                                       >  2:176236/1‑141 (MQ=255)
                                                                                                             aGACGGTTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAATCATATAAGCTAATGAAGAAACTGAGGATGATACCTGAAACGGAAATAATCGTTTc                                 <  2:560761/141‑1 (MQ=255)
                                                                                                             aGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTc                                 >  2:343740/1‑141 (MQ=255)
                                                                                                              tactaTTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCt                                <  1:624250/137‑1 (MQ=255)
                                                                                                              aaCGATTTTCTGAATAAAAATAAACGTGTTTCAAGGAAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCt                                <  2:42397/140‑1 (MQ=255)
                                                                                                               aCGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCta                               <  1:65422/141‑1 (MQ=255)
                                                                                                                 gATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAAAAACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCtaat                             <  2:672866/141‑1 (MQ=255)
                                                                                                                  aTTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCCATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCtaata                            <  1:853430/141‑1 (MQ=255)
                                                                                                                    tttCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATTAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTaataat                          <  2:1033085/141‑1 (MQ=255)
                                                                                                                     ttatgcaGAAAAATAAACGTGTTTttaggtaattgcaatatattgccttgaaacacgtttatttttatgcagaaaatcgtctgaaatactcagaatccgaacgatataaaaagtatattgggtattttagagtgatgaaag                         <  1:50938‑M1/138‑118 (MQ=255)
                                                                                                                         gCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCa                     >  2:527469/1‑141 (MQ=255)
                                                                                                                                  tAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAaaacacgtttatttttatgcagaaaatcgtctgaaatactcagaatccgaacgatataaaaagtatattggggatgttagagtgatgaaaggcgtttcaagaca            <  2:1084095‑M2/141‑105 (MQ=255)
                                                                                                                                    aaCGTGTTTttaggtaattgcaatatattgccttgaaacacgtttatttttatgcagaaaatcgtctgaaatactcagaatccgaacgatataaaaagtatattgggtattttagagtgatgaaaggcgtttcaagacatg          <  2:6068‑M1/141‑133 (MQ=255)
                                                                                                                                      cGTGTTTCAAGGCAATATATTGCAATTACCTAAaaacacgtttatttttatgcagaaaatcgtctgaaatactcagaatccgaacgatataaaaagtatattgggtattttagagtgatgaaaggcgtttcaagacatgtt        <  2:187891‑M2/141‑109 (MQ=255)
                                                                                                                                      CGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGtt        >  1:806090‑M1/1‑141 (MQ=255)
                                                                                                                                       gtgtTTttaggtaattgcaatatattgccttgaaacacgtttatttttatgcagaaaatcgtctgaaatactcagaatccgaacgatataaaaagtatattgggtattttagagtgatgaaaggcgtttcaagacatgttt       <  2:83458‑M1/141‑136 (MQ=255)
                                                                                                                                       GTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGttt       >  2:582600‑M1/1‑141 (MQ=255)
                                                                                                                                        tgtTTttaggtaattgcaatatattgccttgaaacacgtttatttttatgcagaaaatcgtctgaaatactcagaatccgaacgatataaaaagtatattgggtattttagagtgatgaaaggcgtttcaagacatgtttt      <  1:133998‑M1/141‑137 (MQ=255)
                                                                                                                                        tgtTTttaggtaattgcaatatattgccttgaaacacgtttatttttatgcagaaaatcgtctgaaatactcagaatccgaacgatataaaaagtatattgggtattttagagtgatgaaaggcgtttcaagacatgtttt      <  1:441353‑M1/141‑137 (MQ=255)
                                                                                                                                        TGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGTTTc      >  2:660977‑M1/1‑141 (MQ=255)
                                                                                                                                         gtTTttaggtaattgcaatatattgccttgaaacacgtttatttttatgcagaaaatcgtctgaaatactcagaatccgaacgatataaaaagtatattgggtattttagagtgatgaaaggcgtttcaagacatgttttt     >  2:424759‑M1/1‑4 (MQ=255)
                                                                                                                                         GTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGTTTCt     <  2:792616‑M1/141‑1 (MQ=255)
                                                                                                                                          tttttaggtaattgcaatatattgccttgaaacacgtttatttttatgcagaaaatcgtctgaaatactcagaatccgaacgatataaaaagtatattgggtattttagagtgatgaaaggcgtttcaagacatgtttttg    <  2:564317‑M1/141‑139 (MQ=255)
                                                                                                                                          tttttaggtaattgcaatatattgccttgaaacacgtttatttttatgcagaaaatcgtctgaaatactcagaatccgaacgatataaaaagtatattgggtattttagagtgatgaaaggcgtttcaagacatgtttttg    >  2:181214‑M1/1‑3 (MQ=255)
                                                                                                                                          tttttaggtaattgcaatatattgccttgaaacacgtttatttttatgcagaaaatcgtctgaaatactcagaatccgaacgatataaaaagtatattgggtattttagagtgatgaaaggcgtttcaagacatgtttttg    <  2:564392‑M1/141‑139 (MQ=255)
                                                                                                                                           ttttaggtaattgcaatatattgccttgaaacacgtttatttttatgcagaaaatcgtctgaaatactcagaatccgaacgatataaaaagtatattgggtattttagagtgatgaaaggcgtttcaagacatgtttttgt   <  2:611945‑M1/141‑140 (MQ=255)
                                                                                                                                           TTCAAGGCAATATATTGCACTTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATACTGACCATGTTAAGAATGTTTCttt   <  1:47929‑M1/141‑1 (MQ=255)
                                                                                                                                            tttaggtaattgcaatatattgccttgaaacacgtttatttttatgcagaaaatcgtctgaaatactcagaatccgaacgatataaaaagtatattgggtattttagagtgatgaaaggcgtttcaagacatgtttttgtg  <  1:42397‑M1/141‑141 (MQ=255)
                                                                                                                                            tttaggtaattgcaatatattgccttgaaacacgtttatttttatgcagaaaatcgtctgaaatactcagaatccgaacgatataaaaagtatattgggtattttagagtgatgaaaggcgtttcaagacatgtttttgtg  <  2:904960‑M1/141‑141 (MQ=255)
                                                                                                                                            |                                                                                                                                            
TTTCATAATTATCGCCTGTACAATACGCACAAAAACATGTCTTGAAACGCCTTTCATCACTCTAAAATACCCAATATACTTTTTATATCGTTCGGATTCTGAGTATTTCAGACGATTTTCTGCATAAAAATAAACGTGTTTCAAGGCAATATATTGCAATTACCTAAAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGTTTCTTTT  >  CP000730/2636226‑2636506

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.