New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2609395 =	83 (0.940)	3 (0.040)	3/234	NT	4.0%	intergenic (‑225/‑210)	USA300HOU_2471/USA300HOU_2472	hypothetical protein/hypothetical protein
	?	CP000730	2609451 =	68 (0.850)					intergenic (‑281/‑154)	USA300HOU_2471/USA300HOU_2472	hypothetical protein/hypothetical protein
Rejected: Frequency below/above cutoff threshold.

TTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAGTTCATTCTTCGCCTTT  >  CP000730/2609311‑2609590                                                                                                                                             |                                                                                                                                            ttttGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTACTGTATCACATTAGAAGCttttt                                                                                                                                             <  1:991759/141‑1 (MQ=255)     ggAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTttgtt                                                                                                                                         >  1:552934/1‑141 (MQ=255)      gAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACCTGCTACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTttgttg                                                                                                                                        >  1:284888/1‑141 (MQ=255)       aaaaTTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGc                                                                                                                                       >  2:256556/1‑141 (MQ=255)         aaTTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCgg                                                                                                                                     <  2:649319/141‑1 (MQ=255)         aaTTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCgg                                                                                                                                     >  2:552689/1‑141 (MQ=255)                aaaTATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtat                                                                                                                              <  2:730368/141‑1 (MQ=255)                aaaTATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtat                                                                                                                              <  1:377566/141‑1 (MQ=255)                 aaTATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGCTGTTCTTTCGCCATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtata                                                                                                                             <  1:487379/141‑1 (MQ=255)                 aaTATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtata                                                                                                                             <  1:245990/141‑1 (MQ=255)                    atTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTTTTTCTGTGCTTATATta                                                                                                                          >  2:391143/1‑141 (MQ=255)                       tAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTATCACATGCTAAGGAATATGAGACTCCTGCGTCCCATTAGAAGCTTTTTTGTTGCGGAGCTTATATtaata                                                                                                                       >  1:702098/1‑141 (MQ=255)                        aaTTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATtaataa                                                                                                                      <  1:762217/141‑1 (MQ=255)                         aTTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTaataat                                                                                                                     >  1:446856/1‑141 (MQ=255)                         aTTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTaataat                                                                                                                     >  2:328925/1‑141 (MQ=255)                             tataAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGCTGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCa                                                                                                                 <  1:300596/141‑1 (MQ=255)                              ataAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCat                                                                                                                >  1:227351/1‑141 (MQ=255)                                 aaaGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGTTTTTTTGTTGCGGTGCTTATATTAATAATGGCatgaa                                                                                                             <  1:783667/141‑1 (MQ=255)                                 aaaGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatgaa                                                                                                             <  2:501366/141‑1 (MQ=255)                                  aaGGTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatggat                                                                                                            >  2:287409/1‑141 (MQ=255)                                     tttAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatgcgttca                                                                                                         <  1:917689/141‑7 (MQ=255)                                      ttAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAAc                                                                                                        <  1:566389/141‑1 (MQ=255)                                       taataaGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACg                                                                                                       <  1:100336/141‑1 (MQ=255)                                         ataaGTCAGAAAATATTATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCa                                                                                                     <  2:598842/141‑1 (MQ=255)                                         ataaGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGATGTTCCTGTATCACATTAGAAGCTTGTTTGTTTCGGTGCTTATATTAATAATGGCATGAATGAACGCa                                                                                                     <  1:933333/141‑1 (MQ=255)                                          taaGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTTTTGTTCTTATATTAATAATGGCATGAATGAACTCAt                                                                                                    >  2:1042272/1‑141 (MQ=255)                                          taaGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCAt                                                                                                    >  1:281028/1‑141 (MQ=255)                                            aGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGc                                                                                                  <  1:819512/141‑1 (MQ=255)                                            aGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGc                                                                                                  <  2:196068/141‑1 (MQ=255)                                             gTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCt                                                                                                 >  1:490916/1‑141 (MQ=255)                                              tCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTg                                                                                                >  1:921157/1‑141 (MQ=255)                                               cAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGt                                                                                               <  1:309971/141‑1 (MQ=255)                                                aGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTc                                                                                              >  2:947892/1‑141 (MQ=255)                                                 gAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTTCGTTTCTTATATTAATAATGGCATGAATGAACGCATGCTGTCt                                                                                             >  2:304765/1‑141 (MQ=255)                                                 gAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCt                                                                                             <  2:447008/141‑1 (MQ=255)                                                  aaaaTATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTGCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCtt                                                                                            >  1:792656/1‑141 (MQ=255)                                                     atatGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTTTTTCTTTTCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGc                                                                                         >  2:253592/1‑141 (MQ=255)                                                     atatGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGc                                                                                         <  1:63451/141‑1 (MQ=255)                                                      tatGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCt                                                                                        <  1:95441/141‑1 (MQ=255)                                                       atGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTc                                                                                       <  1:437363/141‑1 (MQ=255)                                                        tGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTcc                                                                                      <  1:701376/141‑1 (MQ=255)                                                         gATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTTTTTTTTTTTTTATTTTAATATTGGCATCCATGAATATATGCTATCATAGCTctt                                                                                     >  2:1075579/1‑139 (MQ=255)                                                          aTAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCaa                                                                                    >  1:26129/1‑141 (MQ=255)                                                           tAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTTCTGTTCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAg                                                                                   >  2:825841/1‑141 (MQ=255)                                                           tAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAg                                                                                   >  1:54450/1‑141 (MQ=255)                                                            aaaaTGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGa                                                                                  <  2:989104/141‑1 (MQ=255)                                                                tGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAgtttcaggaatcg                                                                              >  1:636131/1‑129 (MQ=255)                                                                     atgtgctggaGACATGAAAATCTGCTAACATGATACATAATAGGATTTTCCTTGATCACATGATAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATaa                                                                         <  1:593744/132‑1 (MQ=255)                                                                     aTGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATaa                                                                         >  2:30539/1‑141 (MQ=255)                                                                        ttCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCt                                                                      <  1:977658/141‑1 (MQ=255)                                                                           tttAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTAtt                                                                   <  2:1070314/141‑1 (MQ=255)                                                                             tAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTaa                                                                 >  1:846063/1‑141 (MQ=255)                                                                              aGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTATTTCGGTTCTTATATTAATAACGGCATTAATGTACTCATGCTGTCTTAGCTGCTAGTATCATATAAGCTATTaaa                                                                >  2:729694/1‑141 (MQ=255)                                                                                 cATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGGATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACtt                                                             <  1:287409/141‑1 (MQ=255)                                                                                 cATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACtt                                                             <  2:379551/141‑1 (MQ=255)                                                                                   ttAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTcc                                                           >  1:933406/1‑141 (MQ=255)                                                                                    tAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCg                                                          >  1:803313/1‑141 (MQ=255)                                                                                     AAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACttcctt                                                         <  2:290577‑M1/141‑3 (MQ=255)                                                                                       AAGCTTCTAACATGATACGGAATATGAGGTTACTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTc                                                       >  2:290409‑M1/1‑141 (MQ=255)                                                                                        agcttctaatgtgatacaggaacctcatattccgtatcatgttagaagcttttTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCt                                                      >  1:730904‑M2/54‑141 (MQ=255)                                                                                        AGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCt                                                      <  2:19790‑M1/141‑1 (MQ=255)                                                                                         GCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCtt                                                     <  1:349531‑M1/141‑1 (MQ=255)                                                                                           TTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTTCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTg                                                   <  2:147883‑M1/141‑1 (MQ=255)                                                                                           TTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTg                                                   <  2:308751‑M1/141‑1 (MQ=255)                                                                                            tctaatgtgatacaggaacctcatattccgtatcatgttagaagcttttTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGa                                                  >  1:261306‑M2/50‑141 (MQ=255)                                                                                              TAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAat                                                <  2:22008‑M1/141‑1 (MQ=255)                                                                                              TAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAat                                                >  1:112726‑M1/1‑141 (MQ=255)                                                                                               AACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTTCTGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTACACTTCCGTTCTTTGAata                                               <  2:799135‑M1/141‑1 (MQ=255)                                                                                                ACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAatat                                              >  1:201073‑M1/1‑141 (MQ=255)                                                                                                  aTGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTTATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATAttt                                            <  1:769761/141‑1 (MQ=255)                                                                                                    gATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATAttttt                                          <  1:512137/141‑1 (MQ=255)                                                                                                     aTACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATAtttttt                                         <  2:350969/141‑1 (MQ=255)                                                                                                      tACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTCTACAAAGAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTa                                        <  1:884412/141‑1 (MQ=255)                                                                                                      tACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTa                                        <  1:950602/141‑1 (MQ=255)                                                                                                      tACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTa                                        <  2:545096/141‑1 (MQ=255)                                                                                                       aCGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTaa                                       >  1:1036651/1‑141 (MQ=255)                                                                                                         ggAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAAtt                                     <  1:631414/141‑1 (MQ=255)                                                                                                            atatGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCt                                  >  1:675091/1‑141 (MQ=255)                                                                                                               tGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTAc                               >  2:360589/1‑141 (MQ=255)                                                                                                                gAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACt                              <  2:961734/141‑1 (MQ=255)                                                                                                                   gTTCCTGTATCAGATGAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAat                           <  2:915328/141‑1 (MQ=255)                                                                                                                    ttCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAata                          <  2:689156/141‑1 (MQ=255)                                                                                                                        cgtatcatgttagaagcttttTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATatcat                      >  1:151980‑M2/22‑141 (MQ=255)                                                                                                                            tCACATTAGAAGCTTTTTTTTTGTGGTGTTTATATTAATAATGGCATGTATGTACGCATGCTGTTTTAGCTCCAAGTATTATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAg                  <  2:771083/141‑1 (MQ=255)                                                                                                                               caTTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAGTTc               >  1:345169/1‑141 (MQ=255)                                                                                                                                   agaagcttttTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAGTTCAttc           <  1:791335‑M2/131‑1 (MQ=255)                                                                                                                                    gaagcttttTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAGTTCAttct          <  1:372662‑M2/132‑1 (MQ=255)                                                                                                                                     aagcttttTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAGTTCAttctt         <  1:378097‑M2/133‑1 (MQ=255)                                                                                                                                     aagcttttTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAGTTCAttctt         <  1:859511‑M2/133‑1 (MQ=255)                                                                                                                                      agcttgtTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCACGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTAGAATATTCTTTAATTTCTTACTAATATAATCCAGTTCAttcttc        >  2:508048‑M2/8‑141 (MQ=255)                                                                                                                                       gcttttTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAGTTCATTCTTCg       >  2:649114‑M2/7‑141 (MQ=255)                                                                                                                                        cttttTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTCTTTAATTTCTTACTAATATCATCCAGTTCATTCTTCGc      <  1:620525‑M2/136‑1 (MQ=255)                                                                                                                                         ttttTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAGTTCATTCTTCGcc     <  1:816513‑M2/137‑1 (MQ=255)                                                                                                                                         ttttTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAGTTCATTCTTCGcc     <  1:601761‑M2/137‑1 (MQ=255)                                                                                                                                         ttttTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAGTTCATTCTTCGcc     <  2:616430‑M2/137‑1 (MQ=255)                                                                                                                                          tttTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAGTTCATTCTTCGCCt    >  1:53167‑M2/4‑141 (MQ=255)                                                                                                                                            tTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCCGTTCATTCTTCGCCttt  >  1:875403‑M2/2‑141 (MQ=255)                                                                                                                                             |                                                                                                                                            TTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATACGGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGTTCTTTGAATATTTTTTAATTTCTTACTAATATCATCCAGTTCATTCTTCGCCTTT  >  CP000730/2609311‑2609590

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.