| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 551684 = | 38 (1.030) | 4 (0.110) | 3/244 | NT | 11.1% | intergenic (+13/‑203) | cysK/sul | cysteine synthase/dihydropteroate synthase, subunit A |
| ? | CP000730 | 551723 = | 28 (0.800) | intergenic (+52/‑164) | cysK/sul | cysteine synthase/dihydropteroate synthase, subunit A | |||||
ACTAGTTATTAGTATGTACGTTTATTATCTTATCATTCACTGGATATTTTTATCAGAAAAATGTTTAATTTAACGCTCATATTTTTAAAAATATACATGGTAGAAAAAAAGAGCAAGTTATCTCAAAAAGATAACTCACTCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/551828‑551684‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcttttTTTCTACCATGTATATTTTTAAAAATATGAGCGTTAAATTAAACATTTTTCTGATAAAAATATCCAGTGAATGATAAGATAATAAACGTACATACTAATAACTAGTAAATAGCAGGAGTAAATTTTATTAGAGTTAAACA > CP000730/551723‑551862 ACTAGTTATTAGTATGTACGTTTATTATCTTATCATTCACTGGATATTTTTATCAGAAAAATGTTTAATTTAACGCTCATATTTTTAAAAATATACATGGTAGAAAAAAAGAGCAAGTTATCTCAAAAAGATAACTCACTC > 1:223065/1‑141 CTAGTTATTAGTATGTACGTTTATTATCTTATCATTCACTGGATATTTTTATCAGAAAAATGTTTAATTTAACGCTCATATTTTTAAAAATATACATGGTAGAAAAAAAGAGCAAGTTATCTCAAAAAGATAACTCACTCT > 1:98174/1‑141 ttcTTAGTATGTACGTTACTTATCTTATAATTCACTGGATATTTTAATCACAAAAATGTTTAATTTAACGCTCATATTTTTAAAAATATACAAGGTAAAAAAAAAGAGCAAGTTATCTCAAAAAGATAACTCACTCTTTTa < 2:83680/138‑2 ATGTACGTTTATTATCTTATCATTCACTGGATATTTTTATCAGAAAAATGTTTAATTTAACGCTCATATTTTTAAAAATATACATGGTAGAAAAAAAGAGTGAGTTATCTTTTTGAGATAACTTGCTCTTTTTTTCTACCA < 2:21326/141‑1 ATGTACGTTTATTATCTTATCATTCACTGGATATTTTTATCAGAAAAATGTTTAATTTAACGCTCATATTTTTAAAAATATACATGGTAGAAAAAAAGAGTGAGTTATCTTTTTGAGATAACTTGCTCTTTTTTTCTACCA < 2:328785/141‑1 TGTACGTTTATTATCTTATCATTCACTAGATATTTTTATAAGAAAAATGTTTAATTTAACGCTCATATTTTTAAAAATATACATGGTAGAAAAAAAGAGTGAGTTATCTTTTTGAGATAACTTGCTCTTTTTTTCTACCAT < 2:240964/141‑1 AAAGAGCAAGTTATCTCAAAAAGATAACTCACTCTTTTTTTCTACCATGTATATTTTTAAAAATATGAGCGTTAAATTAAACATTTTTCTGATAAAAATATCCAGTGAATGATAAGATAATAAACGTACATACTAATAACT > 1:198349/1‑141 TTTTCTACCATGTATATTTTTAAAAATATGAGCGTTAAATTAAACATTTTTCTGATAAAAATATCCAGTGAATGATAAGATAATAAACGTACATACTAATAACTAGTAAATAGCAGGAGTAAATTTTATTAGAGTTAAACA > 1:117067/1‑141 ACTAGTTATTAGTATGTACGTTTATTATCTTATCATTCACTGGATATTTTTATCAGAAAAATGTTTAATTTAACGCTCATATTTTTAAAAATATACATGGTAGAAAAAAAGAGCAAGTTATCTCAAAAAGATAACTCACTCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/551828‑551684‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcttttTTTCTACCATGTATATTTTTAAAAATATGAGCGTTAAATTAAACATTTTTCTGATAAAAATATCCAGTGAATGATAAGATAATAAACGTACATACTAATAACTAGTAAATAGCAGGAGTAAATTTTATTAGAGTTAAACA > CP000730/551723‑551862 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |