New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2802428 =	45 (1.550)	4 (0.150)	3/248	3.8	9.0%	coding (1288/1509 nt)	gtf1	possible glycosyltransferase
	?	CP000730	2802503 =	39 (1.430)					coding (1213/1509 nt)	gtf1	possible glycosyltransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCATGTGGTGTCTGGGGACCATTGTTAAAATACATTACAATGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTA  >  CP000730/2802295‑2802564                                                                                                                                      |                                                                                                                                         tCATGTGGTGTCTGGGGACCATTGTTAAAATACATTACAATGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTa                                                                                                                                   <  1:208506/141‑1 (MQ=255)           tCTGGGGACCATTGTTAAAATACATTACAATGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTca                                                                                                                         >  1:8574/1‑141 (MQ=255)               gggACCATTGTTAAAATACATTACAATGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAAtgtaccag                                                                                                                     >  1:197406/1‑134 (MQ=255)               gggACCATTGTTAAAATACATTACAATGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACAtt                                                                                                                     <  1:247684/141‑1 (MQ=255)               gggACCATTGTTAAAATACATTACAATGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACAtt                                                                                                                     <  1:147122/141‑1 (MQ=255)                 gACCATTGTTAAAATACATTACAATGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATa                                                                                                                              >  2:326495/1‑130 (MQ=255)                 gACCATTGTTAAAATACATTACAATGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATa                                                                                                                              <  1:326495/130‑1 (MQ=255)                       tGTTAAAATACATTACAATGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCaa                                                                                                             >  1:310261/1‑141 (MQ=255)                        gTTAAAATACATTACAATGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTAcc                                                                                                                                 >  1:189415/1‑120 (MQ=255)                        gTTAAAATACATTACAATGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTAcc                                                                                                                                 >  1:189422/1‑120 (MQ=255)                        gTTAAAATACATTACAATGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTAcc                                                                                                                                 <  2:189422/120‑1 (MQ=255)                        gTTAAAATACATTACAATGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTAcc                                                                                                                                 <  2:189415/120‑1 (MQ=255)                                  aTTACAATGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGt                                                                                                  >  1:229894/1‑141 (MQ=255)                                        aTGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAg                                                                                            >  2:79612/1‑141 (MQ=255)                                             aTGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTAc                                                                                       >  2:219562/1‑141 (MQ=255)                                                      ttttGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCAt                                                                              <  1:259368/141‑1 (MQ=255)                                                      ctttGCGATAACATCACCCACACTATCTTCGTCGGTAACAAACCGTACTAACCAGCCATCTTACCCACCTCGAATAAAGGATGGGTTACCATAATTCACAATTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCAt                                                                              >  2:203156/2‑141 (MQ=255)                                                          gCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAgt                                                                          >  1:247907/1‑141 (MQ=255)                                                                 catcatCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAAcc                                                                   <  2:38908/141‑1 (MQ=255)                                                                      tcCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCaaaa                                                              <  1:188108/141‑1 (MQ=255)                                                                          cacTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCtt                                                          >  2:335043/1‑141 (MQ=255)                                                                           acTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTc                                                         <  1:138895/141‑1 (MQ=255)                                                                            cTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCg                                                        >  2:346339/1‑141 (MQ=255)                                                                             tATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGc                                                       <  2:8574/141‑1 (MQ=255)                                                                               tCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTa                                                     >  1:345443/1‑141 (MQ=255)                                                                                cTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAg                                                    >  1:148519/1‑141 (MQ=255)                                                                                    gtcgGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGa                                                <  1:94425/141‑1 (MQ=255)                                                                                      cgGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATg                                              <  2:310261/141‑1 (MQ=255)                                                                                         tATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCag                                           <  2:25684/141‑1 (MQ=255)                                                                                            cAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCagaaa                                        <  2:230902/141‑1 (MQ=255)                                                                                              aaaGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCagaaaga                                      >  1:143548/1‑141 (MQ=255)                                                                                                 ggTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAAt                                   <  2:143548/141‑1 (MQ=255)                                                                                                    aCCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAAc                                >  2:52858/1‑141 (MQ=255)                                                                                                      cAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTACTCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAACGAAATAACTc                              >  2:340496/1‑141 (MQ=255)                                                                                                      cAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTc                              >  1:304533/1‑141 (MQ=255)                                                                                                        aGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCAt                            <  2:214002/141‑1 (MQ=255)                                                                                                             ccATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCa                       >  2:327379/1‑141 (MQ=255)                                                                                                             ccATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCa                       >  1:145108/1‑141 (MQ=255)                                                                                                                 tttCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATtat                   <  1:134369/141‑1 (MQ=255)                                                                                                                      ccATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAAtt              >  1:101953/1‑141 (MQ=255)                                                                                                                      ccATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAAtt              >  1:197448/1‑141 (MQ=255)                                                                                                                            cGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTtcatca        <  1:303147/141‑1 (MQ=255)                                                                                                                               aTAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAAt                         <  2:224635/121‑1 (MQ=255)                                                                                                                               aTAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAAt                         >  1:224635/1‑121 (MQ=255)                                                                                                                                  aaGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTa  <  2:250220/141‑1 (MQ=255)                                                                                                                                      |                                                                                                                                         TCATGTGGTGTCTGGGGACCATTGTTAAAATACATTACAATGGCATGAGCTAGTTTTGCGATAACATCATCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTA  >  CP000730/2802295‑2802564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.