New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2802428 =	45 (1.550)	4 (0.150)	3/248	3.8	9.0%	coding (1288/1509 nt)	gtf1	possible glycosyltransferase
	?	CP000730	2802503 =	39 (1.430)					coding (1213/1509 nt)	gtf1	possible glycosyltransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTTGTGCGCGGTGTGTATCAATAATTTTACGCAGTCGCGTCTTCTCGCTACCTT  >  CP000730/2802364‑2802643                                                                                                                                            |                                                                                                                                             tcCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCaaaa                                                                                                                                             <  1:188108/141‑1 (MQ=255)     cacTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCtt                                                                                                                                         >  2:335043/1‑141 (MQ=255)      acTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTc                                                                                                                                        <  1:138895/141‑1 (MQ=255)       cTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCg                                                                                                                                       >  2:346339/1‑141 (MQ=255)        tATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGc                                                                                                                                      <  2:8574/141‑1 (MQ=255)          tCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTa                                                                                                                                    >  1:345443/1‑141 (MQ=255)           cTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAg                                                                                                                                   >  1:148519/1‑141 (MQ=255)               gtcgGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGa                                                                                                                               <  1:94425/141‑1 (MQ=255)                 cgGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATg                                                                                                                             <  2:310261/141‑1 (MQ=255)                    tATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCag                                                                                                                          <  2:25684/141‑1 (MQ=255)                       cAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCagaaa                                                                                                                       <  2:230902/141‑1 (MQ=255)                         aaaGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCagaaaga                                                                                                                     >  1:143548/1‑141 (MQ=255)                            ggTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAAt                                                                                                                  <  2:143548/141‑1 (MQ=255)                               aCCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAAc                                                                                                               >  2:52858/1‑141 (MQ=255)                                 cAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTACTCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAACGAAATAACTc                                                                                                             >  2:340496/1‑141 (MQ=255)                                 cAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTc                                                                                                             >  1:304533/1‑141 (MQ=255)                                   aGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCAt                                                                                                           <  2:214002/141‑1 (MQ=255)                                        ccATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCa                                                                                                      >  1:145108/1‑141 (MQ=255)                                        ccATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCa                                                                                                      >  2:327379/1‑141 (MQ=255)                                            tttCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATtat                                                                                                  <  1:134369/141‑1 (MQ=255)                                                 ccATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAAtt                                                                                             >  1:101953/1‑141 (MQ=255)                                                 ccATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAAtt                                                                                             >  1:197448/1‑141 (MQ=255)                                                       cGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTtcatca                                                                                       <  1:303147/141‑1 (MQ=255)                                                          aTAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAAt                                                                                                        <  2:224635/121‑1 (MQ=255)                                                          aTAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAAt                                                                                                        >  1:224635/1‑121 (MQ=255)                                                             aaGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTa                                                                                 <  2:250220/141‑1 (MQ=255)                                                                    ggTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGcc                                                                          <  2:247907/141‑1 (MQ=255)                                                                                tCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGaa                                                              <  1:335043/141‑1 (MQ=255)                                                                                          tCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTtg                                                    <  1:346339/141‑1 (MQ=255)                                                                                           ccAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTtgt                                                   >  1:101597/1‑141 (MQ=255)                                                                                             aaTCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTTGTgc                                                 >  2:312620/1‑141 (MQ=255)                                                                                                  tACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTTGTGCGCGgt                                            >  1:123388/1‑141 (MQ=255)                                                                                                        gTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTTGTGCGCGGTGTGTAt                                      >  1:157988/1‑141 (MQ=255)                                                                                                          ccTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTTGTGCGCGGTGTGTATCa                                    <  2:345443/141‑1 (MQ=255)                                                                                                                  tACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTTGTGCGCGGTGTGTATCAATAAtttt                            >  1:92504/1‑141 (MQ=255)                                                                                                                     cGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTTGTGCGCGGTGTGTATCAATAATTTTACg                         <  2:148519/141‑1 (MQ=255)                                                                                                                      gCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTTGTGCGCGGTGTGTATCAATAATTTTACGc                        <  1:327379/141‑1 (MQ=255)                                                                                                                            aTTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTTGTGCGCGGTGTGTATCAATAATTTTACGCAGTcgc                  >  1:151806/1‑141 (MQ=255)                                                                                                                                 tgtTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTTGTGCGCGGTGTGTATCAATAATTTTACGCAGTCGCGtctt             >  1:310664/1‑141 (MQ=255)                                                                                                                                      aCCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTTGTGCGCGGTGTGTATCAATAATTTTACGCAGTCGCGTCTTCTCGc        <  1:153159/141‑1 (MQ=255)                                                                                                                                            aaCCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTTGTGCGCGGTGTGTATCAATAATTTTACGCAGTCGCGTCTTCTCGCTACCtt  >  1:291193/1‑141 (MQ=255)                                                                                                                                            aaCCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTTGTGCGCGGTGTGTATCAATAATTTTACGCAGTCGCGTCTTCTCGCTACCtt  >  1:305766/1‑141 (MQ=255)                                                                                                                                            aaCCGTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTTGTGCGCGGTGTGTATCAATAATTTTACGCAGTCGCGTCTTCTCGCTACCtt  <  2:305766/141‑1 (MQ=255)                                                                                                                                            |                                                                                                                                             TCCACACTATCTTCGTCGGTATCAAAAGGTACCAAGTAGCCATTTTCCCCATCTCGAATAAAGGTTGGGTTACCATAATTCACATTTAATCCAATCATACCTAGTCCTGAGCCTACCGCTTCCATTAGTGTTAACCCAAAACCTTCGCTAGTTGATGCAGAAAGAAATAACTCATAATCATTATAAATTTCATCAAGTTTAACATGCCCTAGTAAACGAATATAATCTTGTGCGCGGTGTGTATCAATAATTTTACGCAGTCGCGTCTTCTCGCTACCTT  >  CP000730/2802364‑2802643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.