New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_pgi	= 81852	11 (0.630)	5 (0.300)	4/260	1.8	32.8%	coding (107/1092 nt)	leuB	3‑isopropylmalate dehydrogenase, NAD(+)‑dependent
	?	NC_000913_3_pae_pgi	= 81864	10 (0.600)					coding (95/1092 nt)	leuB	3‑isopropylmalate dehydrogenase, NAD(+)‑dependent

GTGGTAAATGTTCCCACTTCGGGCCGCCTACCGAGCCAAACAGCACGGCATCGGCTTGCTCACAACCTTCAACCGTCGCAGGCGGCAGTGGTTGCCCGTGGTTATCAATGGCTGCGCCGCCTACATCGTAATGGCTGGTGGTGATGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_pgi/81703‑81852 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcaACCGCTTTGCGATGCGCATCACCACCAGCCATTACGATGTAGGC  <  NC_000913_3_pae_pgi/81864‑81821                                                                                                                                                                                                    GTGGTAAATGTTCCCACTTCGGGCCGCCTACCGAGCCAAACAGCACGGCATCGGCTTGCTCACAACCTTCAACCGTCGCAGGCGGCAGTGGTTGCCCGTGGTTATCAATGGCTGCGCCGCCTACATCGTAATGGCTGGTGGTGATGCGCA                                              >  2:59356/1‑150      AAATGTTCCCACTTCGGGCCGCCTACCGAGCCAAACAGCACGGCATCGGCTTGCTCACAACCTTCAACCGTCGCAGGCGGCAGTGGTTGCCCGTGGTTATCAATGGCTGCGCCGCCTACATCGTAATGGCTGGTGGTGATGCGCA                                              >  1:74628/1‑145      AAATGTTCCCACTTCGGGCCGCCTACCGAGCCAAACAGCACGGCATCGGCTTGCTCACAACCTTCAACCGTCGCAGGCGGCAGTGGTTGCCCGTGGTTATCAATGGCTGCGCCGCCTACATCGTAATGGCTGGTGGTGATGCGCA                                              <  2:74628/145‑1                ACTTCGGGCGGCCTACCGAGCCGAACAGCGCGGCATCGGCTTGCGCGCAGCCGGCAACCGTCGCAGGCGGCAGTGGTTGCCCGTGGTTATCAATGGCTGCGCCGCCTACATCGTAATGGCTGGTGGTGATGCGCAACCGCTTTGCGAGGC                               <  2:56696/150‑1                  TTCGGGCCGCCTACCGAGCCAAACAGCACGGCATCGGCTTGCTCACAACCTTCAACCGTCGCAGGCGGCAGTGGTTGCCCGTGGTTATCAATGGCTGCGCCGCCTACATCGTAATGGCTGGTGGTGATGCGCAACCGCTTTGCGATGCGC                             <  2:170656/150‑1                                             gCGGCATCGGCTTGCGCACAACCTTCAACCGTCGCAGGCAGCGGTGGTTGCCGGTGGTTATCAATGGCTGCGCGGCCTACATCGTAATGGCGGGTGGTGATGCGCAACCGCTTTGCGATGCGCATCACCACCAGCCATTACGATGTAGGC  <  3:105273/149‑1                                                                                                            ATGGCTGCGCCGCCTACATCGTAATGGCTGGTGGTGATGCGCAACCGCTTTGCGATGCGC                             <  1:180210/60‑1                                                                                                            ATGGCTGCGCCGCCTACATCGTAATGGCTGGTGGTGATGCGCAACCGCTTTGCGATGCGC                             >  2:180210/1‑60                                                                                                                                                                                                    GTGGTAAATGTTCCCACTTCGGGCCGCCTACCGAGCCAAACAGCACGGCATCGGCTTGCTCACAACCTTCAACCGTCGCAGGCGGCAGTGGTTGCCCGTGGTTATCAATGGCTGCGCCGCCTACATCGTAATGGCTGGTGGTGATGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_pgi/81703‑81852 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgcaACCGCTTTGCGATGCGCATCACCACCAGCCATTACGATGTAGGC  <  NC_000913_3_pae_pgi/81864‑81821

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.