New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2117295 =	70 (1.270)	3 (0.060)	3/242	NT	4.7%	intergenic (‑140/+73)	ssb/recT	hypothetical protein/possible recombination protein RecT
	?	CP000730	2117348 =	55 (1.050)					intergenic (‑193/+20)	ssb/recT	hypothetical protein/possible recombination protein RecT
Rejected: Frequency below/above cutoff threshold.

CATGTTCGTGTGTGATAAGACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTCTAATTCTGTGTATTGTGCTTCTTCAAGAACTGGT  >  CP000730/2117209‑2117488                                                                                                                                            |                                                                                                                                             cATGTTCGTGTGTGATAAGACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAAc                                                                                                                                             <  1:377188/141‑1 (MQ=255) cATGTTCGTGTGTGATAAGACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAAc                                                                                                                                             <  1:377243/141‑1 (MQ=255)  aTGTTCGTGTGTGATAAGACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAAcc                                                                                                                                            <  2:203453/141‑1 (MQ=255)    gTTCGTGTGTGATAAGACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAg                                                                                                                                          >  2:231855/1‑141 (MQ=255)    gTTCGTGTGTGATAAGACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAg                                                                                                                                          >  1:257892/1‑141 (MQ=255)     ttCGTGTGTGATAAGACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGt                                                                                                                                         <  2:641334/141‑1 (MQ=255)         tgtgtgATAAGACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCt                                                                                                                                     <  2:507201/141‑1 (MQ=255)          gtgtgATAAGACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTa                                                                                                                                    >  2:169117/1‑141 (MQ=255)          aagtgATAAGACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTa                                                                                                                                    <  1:654063/139‑1 (MQ=255)                  aGACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTAGCTATTGTTTCa                                                                                                                            >  2:570555/1‑141 (MQ=255)                   gACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCaa                                                                                                                           <  1:477749/141‑1 (MQ=255)                    acacCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAAt                                                                                                                          >  1:674591/1‑141 (MQ=255)                       cccTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTaa                                                                                                                       >  1:612213/1‑141 (MQ=255)                       cccTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTaa                                                                                                                       >  2:475916/1‑141 (MQ=255)                       cccTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTaa                                                                                                                       >  2:58343/1‑141 (MQ=255)                          tGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAAt                                                                                                                    >  1:161990/1‑141 (MQ=255)                            cTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATgg                                                                                                                  >  1:615017/1‑141 (MQ=255)                                atGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGctct                                                                                                              >  2:392180/1‑141 (MQ=255)                                  gTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCtcttc                                                                                                            >  1:200302/1‑141 (MQ=255)                                   tCTTGTTTTATATTTGAAATGCGTTTGAACACGTTCAAATTTTATACCTGCCTCAAATAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCtcttct                                                                                                           >  2:695025/1‑141 (MQ=255)                                         tttATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGctt                                                                                                     <  2:304335/141‑1 (MQ=255)                                             tatTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGctttctt                                                                                                 <  1:61890/141‑1 (MQ=255)                                              atTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGctttcttt                                                                                                >  2:542960/1‑141 (MQ=255)                                                       gCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGTACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGc                                                                                       <  1:493605/141‑1 (MQ=255)                                                       gCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGc                                                                                       >  2:562358/1‑141 (MQ=255)                                                       gCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGc                                                                                       >  2:226482/1‑141 (MQ=255)                                                        cTTTTGAACACGTCCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCa                                                                                      >  1:522176/1‑141 (MQ=255)                                                         ttttGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAg                                                                                     <  2:575264/141‑1 (MQ=255)                                                           ttGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGt                                                                                   >  2:574347/1‑141 (MQ=255)                                                            tGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGtt                                                                                  >  1:312279/1‑141 (MQ=255)                                                              aaCACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCt                                                                                <  1:317853/141‑1 (MQ=255)                                                                  cGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTa                                                                            >  1:80740/1‑141 (MQ=255)                                                                  cGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTa                                                                            >  1:435284/1‑141 (MQ=255)                                                                   gtgcAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTAt                                                                           <  2:612213/138‑1 (MQ=255)                                                                   gTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTAt                                                                           <  2:200302/141‑1 (MQ=255)                                                                   gTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTAt                                                                           <  1:326890/141‑1 (MQ=255)                                                                    ttCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTAtt                                                                          >  1:499797/1‑141 (MQ=255)                                                                        aaTTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATttctt                                                                      >  1:353656/1‑141 (MQ=255)                                                                         aTTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATttcttc                                                                     <  1:492245/141‑1 (MQ=255)                                                                            ttATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCaaa                                                                  >  2:1966/1‑141 (MQ=255)                                                                             tataCCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAg                                                                 >  1:77502/1‑141 (MQ=255)                                                                                 ccTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTTTGTTGTAGGTTTTTTTATTTCTTTAAAGTCaa                                                             >  2:386358/1‑140 (MQ=255)                                                                                    gCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATa                                                          <  2:690459/141‑1 (MQ=255)                                                                                     ccTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATAc                                                         <  2:304373/141‑1 (MQ=255)                                                                                      cTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACa                                                        <  2:6782/141‑1 (MQ=255)                                                                                         AAGTAATAACGTAGTACGTCCATCATTTAAGACGTAGCAGTAACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTACTTCAAAGTCAGATACATCa                                                     <  2:315037‑M1/141‑1 (MQ=255)                                                                                           GTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAAt                                                   <  1:54953‑M1/141‑1 (MQ=255)                                                                                              gtaactgctacgtcttaaatgatggacgtactacgttactacttgaACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAgg                                                >  1:10287‑M2/47‑141 (MQ=255)                                                                                                aaCGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTAttt                                                                         <  2:38182/114‑1 (MQ=255)                                                                                                aaCGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTAttt                                                                         >  1:38182/1‑114 (MQ=255)                                                                                                aaCGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCt                                              >  1:22893/1‑141 (MQ=255)                                                                                                 aCGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTATTTTATTACTTCAAAGTCAGATACATCAATAGGCtt                                             <  2:312279/141‑1 (MQ=255)                                                                                                   tgctacgtcttaaatgatggacgtactacgttactacttgaACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGc                                                                                                       >  1:114593‑M2/42‑81 (MQ=255)                                                                                                   tgctacgtcttaaatgatggacgtactacgttactacttgaACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGc                                                                                                       <  2:114593‑M2/40‑1 (MQ=255)                                                                                                    tagtaCGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATc                                          <  2:465421/141‑1 (MQ=255)                                                                                                          gTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTc                                    <  1:601800/141‑1 (MQ=255)                                                                                                          gTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTc                                    >  2:236280/1‑141 (MQ=255)                                                                                                          gTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTc                                    <  1:574347/141‑1 (MQ=255)                                                                                                               tcatTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTCTAAtt                               >  2:518237/1‑141 (MQ=255)                                                                                                               tcatTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTCTAAtt                               <  2:539988/141‑1 (MQ=255)                                                                                                                catTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTCTAATTc                              >  2:613314/1‑141 (MQ=255)                                                                                                                      aGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTCTAATTCTGTGTa                        <  1:693798/141‑1 (MQ=255)                                                                                                                      aGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTCTAATTCTGTGTa                        <  1:392180/141‑1 (MQ=255)                                                                                                                               aGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTCTAATTCTGTGTATTGTGcttc               >  2:548271/1‑141 (MQ=255)                                                                                                                                gTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTCTAATTCTGTGTATTGTGcttct              <  1:11684/141‑1 (MQ=255)                                                                                                                                  tACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTCTAATTCTGTGTATTGTGCttcttc            <  1:602804/141‑1 (MQ=255)                                                                                                                                    ccACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTCTAATTCTGTGTATTGTGCTTCTTCaa          <  2:410185/141‑1 (MQ=255)                                                                                                                                     cACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTCTAATTCTGTGTATTGTGCTTCTTCAAg         >  1:40165/1‑141 (MQ=255)                                                                                                                                           aACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTCTAATTCTGTGTATTGTGCTTCTTCAAGAACTgg   <  2:398491‑M2/140‑1 (MQ=255)                                                                                                                                            aCCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTCTAATTCTGTGTATTGTGCTTCTTCAAGAACTGgt  >  1:343383/1‑141 (MQ=255)                                                                                                                                            aCCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTCTAATTCTGTGTATTGTGCTTCTTCAAGAACTGgt  <  1:596592/141‑1 (MQ=255)                                                                                                                                            |                                                                                                                                             CATGTTCGTGTGTGATAAGACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTTCAAAGTCAGATACATCAATAGGCTTATCATTTTCTAATTCTGTGTATTGTGCTTCTTCAAGAACTGGT  >  CP000730/2117209‑2117488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.