New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	468257 =	94 (1.330)	3 (0.050)	3/246	10.6	3.4%	coding (638/792 nt)	USA300HOU_0443	hypothetical lipoprotein
	?	CP000730	468356 =	86 (1.340)					coding (737/792 nt)	USA300HOU_0443	hypothetical lipoprotein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCAATATGGAAACTTTAAAAATTTCGAAAAATACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTC  >  CP000730/468117‑468396                                                                                                                                             |                                                                                                                                            gCAATATGGAAACTTTAAAAATTTCGAAAAATACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACAt                                                                                                                                             >  1:418294/1‑141 (MQ=255)  cAATATGGAAACTTTAAAAATTTCGAAAAATACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACAACGTAAAAGATATGACAtt                                                                                                                                            <  1:415009/141‑1 (MQ=255)         gAAACGTTAAAAATTTCGAAAAATACAACAATGGTGAGTTTTCATATAATCCTGACGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACCATGTAAGGCAACGACGTAAAAGATATGACATTTcaacaa                                                                                                                                     >  2:669189/1‑141 (MQ=255)          aaaCTTTAAAAATTTCGAAAAATACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACaaa                                                                                                                                    >  2:170309/1‑141 (MQ=255)           aaCTTTAAAAATTTCGAAAAATACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACaaaa                                                                                                                                   <  2:54003/141‑1 (MQ=255)             cTTTAAAAATTTCGAAAAATACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGa                                                                                                                                 <  1:228498/141‑1 (MQ=255)             cTTTAAAAATTTCGAAAAATACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGa                                                                                                                                 <  1:57716/141‑1 (MQ=255)             cTTTAAAAATTTCGAAAAATACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGa                                                                                                                                 <  1:635071/141‑1 (MQ=255)               ttAAAAATTTCGAAAAATACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGaaa                                                                                                                               >  2:11027/1‑141 (MQ=255)                tAAAAATTTCGAAAAATACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAac                                                                                                                              <  2:22927/141‑1 (MQ=255)                  aaaaTTTCGAAAAATACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAacac                                                                                                                            >  1:169039/1‑141 (MQ=255)                        tCGAAAAATACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGt                                                                                                                      <  1:231039/141‑1 (MQ=255)                         cGAAAAATACAACAATGGTAAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGtt                                                                                                                     <  2:285773/141‑1 (MQ=255)                           aaaaaTACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTAc                                                                                                                   >  1:183829/1‑141 (MQ=255)                            aaaaTACAACAATGGTGAGTTTTCATATAATCCTGGAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACt                                                                                                                  <  1:566099/141‑1 (MQ=255)                            aaaaTACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACt                                                                                                                  <  1:150491/141‑1 (MQ=255)                              aaTACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACttt                                                                                                                <  1:138752/141‑1 (MQ=255)                               aTACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACtttt                                                                                                               <  2:550269/141‑1 (MQ=255)                                  caacaaTGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGaa                                                                                                            >  1:799472/1‑141 (MQ=255)                                    acaaTGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAg                                                                                                          >  1:508921/1‑141 (MQ=255)                                    acaaTGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTATGAAAg                                                                                                          >  1:389146/1‑141 (MQ=255)                                      aaTGGTGAGTTTTCATATGATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGt                                                                                                        <  2:208474/141‑1 (MQ=255)                                          gagaattttCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTggag                                                                                                    <  1:215132/136‑1 (MQ=255)                                               ttttCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGAt                                                                                               <  2:183829/141‑1 (MQ=255)                                                 ttCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGAttt                                                                                             <  2:596279/141‑1 (MQ=255)                                                 ttCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGAttt                                                                                             <  2:206406/141‑1 (MQ=255)                                                        aaTCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAAt                                                                                      <  1:101178/141‑1 (MQ=255)                                                        aaTCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAAt                                                                                      >  2:549457/1‑141 (MQ=255)                                                        aaTCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAAt                                                                                      <  1:133874/141‑1 (MQ=255)                                                        aaTCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAAt                                                                                      <  2:329930/141‑1 (MQ=255)                                                         aTCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAAtt                                                                                     <  1:520186/141‑1 (MQ=255)                                                              gAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCa                                                                                >  1:502585/1‑141 (MQ=255)                                                                aGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGt                                                                              <  2:477425/141‑1 (MQ=255)                                                                aGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGt                                                                              >  2:591831/1‑141 (MQ=255)                                                                 gCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAATGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGtt                                                                             >  2:672621/1‑141 (MQ=255)                                                                 gCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGtt                                                                             >  1:608220/1‑141 (MQ=255)                                                                    ccAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACCAAAGTGCTACAGAAGTTACTTTTGCAAGGTGGAGGAGCTTTAAAAAATTCCTCAGTTGGt                                                                          >  1:292243/1‑141 (MQ=37)                                                                     cAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTc                                                                         <  1:451757/141‑1 (MQ=255)                                                                      aaTTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGTAacttcggtgt                                                                                                                      >  1:788196/1‑87 (MQ=25)                                                                      aaTTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGTAacttcggtgt                                                                                                                      <  2:788196/95‑9 (MQ=25)                                                                            ttCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGa                                                                  >  1:776744/1‑141 (MQ=255)                                                                              cGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGT‑AAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGatat                                                               >  2:182558/1‑141 (MQ=255)                                                                                 cTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTg                                                             <  1:170309/141‑1 (MQ=255)                                                                                   aaaTATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGaa                                                           <  1:601446/141‑1 (MQ=255)                                                                                     atatCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAAtt                                                         <  1:67275/141‑1 (MQ=255)                                                                                      tatCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAAttt                                                        <  2:258288/141‑1 (MQ=255)                                                                                      tatCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAAttt                                                        <  2:143408/141‑1 (MQ=255)                                                                                        tCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTAc                                                      >  2:82764/1‑141 (MQ=255)                                                                                          aaTTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGata                                                                <  2:567119/129‑1 (MQ=255)                                                                                          aaTTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGata                                                                >  1:567119/1‑129 (MQ=255)                                                                                          aaTTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACtt                                                    <  1:577983/141‑1 (MQ=255)                                                                                             tACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTttg                                                 <  1:813241/141‑1 (MQ=255)                                                                                               cacaACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTttgtt                                               >  2:480275/1‑141 (MQ=255)                                                                                                acaACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAGATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTttgttg                                              <  1:727851/141‑1 (MQ=255)                                                                                                   aCGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTgaaa                                           <  2:188484/141‑1 (MQ=255)                                                                                                   aCGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTgaaa                                           >  2:226241/1‑141 (MQ=255)                                                                                                    cGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTgaaag                                          <  2:822820/141‑1 (MQ=255)                                                                                                        gatTACAATGTAAGGCAACTTCGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGaaaa                                      <  1:813363/141‑1 (MQ=255)                                                                                                        gatTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGaaaa                                      >  2:222696/1‑141 (MQ=255)                                                                                                          ttACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAgg                                    <  2:653955/141‑1 (MQ=255)                                                                                                           tACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGt                                   >  1:536126/1‑141 (MQ=255)                                                                                                             cAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTga                                 >  1:144545/1‑141 (MQ=255)                                                                                                              aaTGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTgag                                <  1:838589/141‑1 (MQ=255)                                                                                                                tGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGaa                              >  1:771332/1‑141 (MQ=255)                                                                                                                   aaGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAatat                           >  2:42900/1‑141 (MQ=255)                                                                                                                    aGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACATTTGTTGAAAGAAAAGGTGAGAAtatt                          >  1:190918/1‑141 (MQ=255)                                                                                                                    aGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGAATTAAAAAAGGCCACAGTGAGTCAAAACGATATTTAATTTACTTTTGTTGAAAGAAAAGGGGAGAAtatt                          >  1:79970/1‑141 (MQ=255)                                                                                                                       cAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATCGAATTTACTTTTGTTGAAAGAAAAGGTGAGAAtatttat                       >  1:626699/1‑141 (MQ=255)                                                                                                                       cAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTATGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAAtatttat                       <  2:389146/141‑1 (MQ=255)                                                                                                                        aaCTACGGAAAAGGTATGTGATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGTTCAAAACGATATTTAATTTACTTTGGTTGAAAGAAAAGGTGAGAAtatttatt                      <  2:292323/141‑1 (MQ=255)                                                                                                                         aCTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATatttattt                     >  1:264014/1‑141 (MQ=255)                                                                                                                          cTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTAtttt                    >  1:628284/1‑141 (MQ=255)                                                                                                                            aCGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTaa                  >  1:194269/1‑141 (MQ=255)                                                                                                                            aCGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTaa                  >  1:193311/1‑141 (MQ=255)                                                                                                                            aCGTAAAACATATGACATTTCAACAACAGAACCACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAACAAATTCCTAAGTTGGTCACAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTaa                  <  1:425035/141‑1 (MQ=255)                                                                                                                              gTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACg                >  2:741087/1‑141 (MQ=255)                                                                                                                               tAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGa               <  2:268229/141‑1 (MQ=255)                                                                                                                                 aaaGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATa             >  2:347191/1‑141 (MQ=255)                                                                                                                                   aGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAgt           <  1:21200/141‑1 (MQ=255)                                                                                                                                   aGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAgt           <  1:309589/141‑1 (MQ=255)                                                                                                                                    gATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTAAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAgtg          >  2:728864/1‑141 (MQ=255)                                                                                                                                     atatGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAgtgt         <  2:838063/141‑1 (MQ=255)                                                                                                                                      tatGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGtt        <  2:502585/141‑1 (MQ=255)                                                                                                                                       atGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTg       <  2:150810/141‑1 (MQ=255)                                                                                                                                       atGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTg       <  2:236987/141‑1 (MQ=255)                                                                                                                                        tGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGa      >  1:413691/1‑141 (MQ=255)                                                                                                                                        tGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGa      <  2:771332/141‑1 (MQ=255)                                                                                                                                          aCATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAAt    >  2:763942/1‑141 (MQ=255)                                                                                                                                          aCATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAAt    <  2:621958/141‑1 (MQ=255)                                                                                                                                          aCATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAAt    <  2:828348/141‑1 (MQ=255)                                                                                                                                          aCATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAAt    <  2:159856/141‑1 (MQ=255)                                                                                                                                          aCATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAAt    <  1:45410/141‑1 (MQ=255)                                                                                                                                            aTTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTc  <  2:58/141‑1 (MQ=255)                                                                                                                                            aTTGCAACAAAAGAGACACCGAAGGTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTc  <  2:232412/141‑1 (MQ=255)                                                                                                                                             |                                                                                                                                            GCAATATGGAAACTTTAAAAATTTCGAAAAATACAACAATGGTGAGTTTTCATATAATCCTGAAGCACCAATTTATTCGGCTAAATATCAATTACACAACGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTC  >  CP000730/468117‑468396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.