New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	468257 =	94 (1.330)	3 (0.050)	3/246	10.6	3.4%	coding (638/792 nt)	USA300HOU_0443	hypothetical lipoprotein
	?	CP000730	468356 =	86 (1.340)					coding (737/792 nt)	USA300HOU_0443	hypothetical lipoprotein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATCAAAAAATGTGCAAAGAGATGTGACAAGATGAAGTGTTTTCA  >  CP000730/468216‑468494                                                                                                                                             |                                                                                                                                           cGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTgaaag                                                                                                                                            <  2:822820/141‑1 (MQ=255)     gatTACAATGTAAGGCAACTTCGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGaaaa                                                                                                                                        <  1:813363/141‑1 (MQ=255)     gatTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGaaaa                                                                                                                                        >  2:222696/1‑141 (MQ=255)       ttACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAgg                                                                                                                                      <  2:653955/141‑1 (MQ=255)        tACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGt                                                                                                                                     >  1:536126/1‑141 (MQ=255)          cAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTga                                                                                                                                   >  1:144545/1‑141 (MQ=255)           aaTGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTgag                                                                                                                                  <  1:838589/141‑1 (MQ=255)             tGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGaa                                                                                                                                >  1:771332/1‑141 (MQ=255)                aaGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAatat                                                                                                                             >  2:42900/1‑141 (MQ=255)                 aGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACATTTGTTGAAAGAAAAGGTGAGAAtatt                                                                                                                            >  1:190918/1‑141 (MQ=255)                 aGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGAATTAAAAAAGGCCACAGTGAGTCAAAACGATATTTAATTTACTTTTGTTGAAAGAAAAGGGGAGAAtatt                                                                                                                            >  1:79970/1‑141 (MQ=255)                    cAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATCGAATTTACTTTTGTTGAAAGAAAAGGTGAGAAtatttat                                                                                                                         >  1:626699/1‑141 (MQ=255)                    cAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTATGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAAtatttat                                                                                                                         <  2:389146/141‑1 (MQ=255)                     aaCTACGGAAAAGGTATGTGATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGTTCAAAACGATATTTAATTTACTTTGGTTGAAAGAAAAGGTGAGAAtatttatt                                                                                                                        <  2:292323/141‑1 (MQ=255)                      aCTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATatttattt                                                                                                                       >  1:264014/1‑141 (MQ=255)                       cTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTAtttt                                                                                                                      >  1:628284/1‑141 (MQ=255)                         aCGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTaa                                                                                                                    >  1:194269/1‑141 (MQ=255)                         aCGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTaa                                                                                                                    >  1:193311/1‑141 (MQ=255)                         aCGTAAAACATATGACATTTCAACAACAGAACCACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAACAAATTCCTAAGTTGGTCACAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTaa                                                                                                                    <  1:425035/141‑1 (MQ=255)                           gTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACg                                                                                                                  >  2:741087/1‑141 (MQ=255)                            tAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGa                                                                                                                 <  2:268229/141‑1 (MQ=255)                              aaaGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATa                                                                                                               >  2:347191/1‑141 (MQ=255)                                aGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAgt                                                                                                             <  1:21200/141‑1 (MQ=255)                                aGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAgt                                                                                                             <  1:309589/141‑1 (MQ=255)                                 gATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTAAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAgtg                                                                                                            >  2:728864/1‑141 (MQ=255)                                  atatGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAgtgt                                                                                                           <  2:838063/141‑1 (MQ=255)                                   tatGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGtt                                                                                                          <  2:502585/141‑1 (MQ=255)                                    atGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTg                                                                                                         <  2:150810/141‑1 (MQ=255)                                    atGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTg                                                                                                         <  2:236987/141‑1 (MQ=255)                                     tGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGa                                                                                                        >  1:413691/1‑141 (MQ=255)                                     tGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGa                                                                                                        <  2:771332/141‑1 (MQ=255)                                       aCATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAAt                                                                                                      <  2:828348/141‑1 (MQ=255)                                       aCATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAAt                                                                                                      >  2:763942/1‑141 (MQ=255)                                       aCATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAAt                                                                                                      <  2:621958/141‑1 (MQ=255)                                       aCATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAAt                                                                                                      <  2:159856/141‑1 (MQ=255)                                       aCATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAAt                                                                                                      <  1:45410/141‑1 (MQ=255)                                         aTTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTc                                                                                                    <  2:58/141‑1 (MQ=255)                                         aTTGCAACAAAAGAGACACCGAAGGTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTc                                                                                                    <  2:232412/141‑1 (MQ=255)                                              aacaaAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATAcc                                                                                               >  1:800749/1‑141 (MQ=255)                                               acaaAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCa                                                                                              >  1:668706/1‑141 (MQ=255)                                               acaaAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCa                                                                                              >  2:751942/1‑141 (MQ=255)                                               acaaAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGAAATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCa                                                                                              >  1:357474/1‑141 (MQ=255)                                                caaAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCaa                                                                                             <  1:368258/141‑1 (MQ=255)                                                  aaaGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCaagt                                                                                           <  1:26277/141‑1 (MQ=255)                                                    aGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCaagtaa                                                                                         >  1:616753/1‑141 (MQ=255)                                                      aaaCACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAATAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCaagtaagt                                                                                       <  2:292243/141‑1 (MQ=255)                                                       aaCACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAagtaagta                                                                                      >  2:716815/1‑141 (MQ=255)                                                       aaCACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAagtaagta                                                                                      >  1:735611/1‑141 (MQ=255)                                                       aaCACCGAAGTTACTTTTGAAAGGTGGAGGAGATATAAAAAATTCCTCAGTGGGTCAAAACGATATTGAATGTACTTTTGTTGAAAGAAAAGGTGAGAATAGTTATTTTAACGATAGTGTTGAATTCATACCAagtaagta                                                                                      >  2:817417/1‑141 (MQ=255)                                                        acacCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAgtaagtaa                                                                                     >  2:706117/1‑141 (MQ=255)                                                          acCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAg                                                                                   >  2:133392/1‑141 (MQ=255)                                                          acCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAg                                                                                   >  2:830028/1‑141 (MQ=255)                                                              aaGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGttaa                                                                               >  2:720665/1‑141 (MQ=255)                                                                gTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGttaaat                                                                             >  1:529810/1‑141 (MQ=255)                                                                  tACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGttaaatta                                                                           <  2:199233/141‑1 (MQ=255)                                                                   aCTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGttaaattaa                                                                          >  1:84813/1‑141 (MQ=255)                                                                       ttGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAAtg                                                                      >  2:702353/1‑141 (MQ=255)                                                                       ttGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAAtg                                                                      <  1:182558/141‑1 (MQ=255)                                                                       ttGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAAtg                                                                      <  1:702353/141‑1 (MQ=255)                                                                         gAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAAtgtg                                                                    <  2:348876/141‑1 (MQ=255)                                                                          aaaGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAAtgtgt                                                                   <  2:413691/141‑1 (MQ=255)                                                                            aGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATATCAAGAAAGTAAAGTTAAATTAAAATGTGTgg                                                                 >  1:678762/1‑141 (MQ=255)                                                                             ggTTGAGGTGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGt                                                                <  2:357474/141‑1 (MQ=255)                                                                             ggTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGt                                                                <  2:240810/141‑1 (MQ=255)                                                                              gTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGtt                                                               >  2:318297/1‑141 (MQ=255)                                                                              gTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGtt                                                               >  2:304155/1‑141 (MQ=255)                                                                              gTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGtt                                                               >  2:172170/1‑141 (MQ=255)                                                                                 gaggagATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGAGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGa                                                            <  2:135568/141‑1 (MQ=255)                                                                                       aTTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAAt                                                      <  1:591831/141‑1 (MQ=255)                                                                                       aTTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAAt                                                      <  2:194269/141‑1 (MQ=255)                                                                                        tttAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATg                                                     <  1:133790/141‑1 (MQ=255)                                                                                        tttAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCACACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATg                                                     <  1:672621/141‑1 (MQ=255)                                                                                            aaaaaTTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATGAAAATGTGTGGTGAGATGAAATGATCa                                                 >  2:294864/1‑141 (MQ=255)                                                                                             aaaaTTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCaa                                                >  1:308071/1‑141 (MQ=255)                                                                                                aTTCCTCAGTTGGTTAAAACGATATTGAATTTACTTTTGTGTAAAGAAAATTTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAata                                             <  1:594580/141‑1 (MQ=255)                                                                                                aTTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAata                                             <  1:46843/141‑1 (MQ=255)                                                                                                 ttCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAatat                                            >  1:713509/1‑141 (MQ=255)                                                                                                  tCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATc                                           <  2:169039/141‑1 (MQ=255)                                                                                                   ccTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATCa                                          <  1:172170/141‑1 (MQ=255)                                                                                                        gTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATCaaaaaa                                     >  2:516340/1‑141 (MQ=255)                                                                                                           ggTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATCAAAAAAtgt                                  <  1:463090/141‑1 (MQ=255)                                                                                                              cAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATCAAAAAATGTGCa                               >  2:736952/1‑141 (MQ=255)                                                                                                               aaaaCGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATCAAAAAATGTGCaa                              <  1:763942/141‑1 (MQ=255)                                                                                                                       atTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATCAAAAAATGTGCAAAGAGAtgt                      <  1:117541/141‑1 (MQ=255)                                                                                                                         tGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATCAAAAAATGTGCAAAGAGATGTGa                    <  1:42900/141‑1 (MQ=255)                                                                                                                               tACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATCAAAAAATGTGCAAAGAGATGTGACAAGAt              <  1:432402/141‑1 (MQ=255)                                                                                                                                   tttGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGATAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATCAAAAAATGTGCAAAGAGATGTGACAAGATGAAg          <  2:508921/141‑1 (MQ=255)                                                                                                                                   gttgttgAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATAAAAAATAAAAAAATGTGCAAAGAGATGTGACAAGATGAAg          <  2:259624/140‑1 (MQ=255)                                                                                                                                    ttgttgAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATCAAAAAATGTGCAAAGAGATGTGACAAGATGAAgt         <  1:226241/141‑1 (MQ=255)                                                                                                                                      gttgAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATCAAAAAATGTGCAAAGAGATGTGACAAGATGAAgtgt       >  1:279199/1‑141 (MQ=255)                                                                                                                                       ttgAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATCAAAAAATGTGCAAAGAGATGTGACAAGATGAAGTGtt      >  2:576418/1‑141 (MQ=255)                                                                                                                                          aaagaaaAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCGAATATCAAAAAATGTGCAAAGAGATGTGACAAGATGAAGTGTTTTc   <  2:799472/141‑1 (MQ=255)                                                                                                                                           aagaaaAGGTGAGAATATTTATTTTACCGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTCGATGAAATGATCAAATATCAAAAAATGTGCAAAGAGATGTGACAAGATGAAGTGTTTTCa  <  2:79970/141‑1 (MQ=255)                                                                                                                                           aagaaaAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGAt                                                           >  2:516454/1‑84 (MQ=255)                                                                                                                                           aagaaaAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGAt                                                           <  1:516454/84‑1 (MQ=255)                                                                                                                                           aagaaaAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATCAAAAAATGTGCAAAGAGATGTGACAAGATGAAGTGTTTTCa  >  1:524345/1‑141 (MQ=255)                                                                                                                                             |                                                                                                                                           CGATGATTACAATGTAAGGCAACTACGTAAAAGATATGACATTTCAACAAAAGAAACACCGAAGTTACTTTTGAAAGGTGGAGGAGATTTAAAAAATTCCTCAGTTGGTCAAAACGATATTGAATTTACTTTTGTTGAAAGAAAAGGTGAGAATATTTATTTTAACGATAGTGTTGAATTCATACCAAGTAAGTAAAGTTAAATTAAAATGTGTGGTTAGATGAAATGATCAAATATCAAAAAATGTGCAAAGAGATGTGACAAGATGAAGTGTTTTCA  >  CP000730/468216‑468494

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.