New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1873411 =	100 (1.410)	3 (0.050)	3/244	10.5	3.5%	intergenic (‑87/+663)	USA300HOU_1742/USA300HOU_1743	M20 family peptidase/hypothetical protein
	?	CP000730	1873475 =	73 (1.140)					intergenic (‑151/+599)	USA300HOU_1742/USA300HOU_1743	M20 family peptidase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTAAGTCATTAATGATTTGATCTTCGTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATT  >  CP000730/1873273‑1873543                                                                                                                                           |                                                                                                                                     ttAAGTCATTAATGATTTGATCTTCGTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATaaa                                                                                                                                    >  1:702890/1‑141 (MQ=255) ttAAGTCATTAATGATTTGATCTTCGTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATaaa                                                                                                                                    <  1:533505/141‑1 (MQ=255)   aaGTCATTAATGATTTGATCTTCGTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATaaaaa                                                                                                                                  >  1:642741/1‑141 (MQ=255)    aGTCATTAATGATTTGATCTTCGTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAg                                                                                                                                 <  2:167281/141‑1 (MQ=255)       cATTAATGATTTGATCTTCGTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGaa                                                                                                                              <  1:836073/141‑1 (MQ=255)        aTTAATGATTTGATCTTCGTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAAc                                                                                                                             <  2:78425/141‑1 (MQ=255)            aTGATTTGATCTTCGTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACaaaa                                                                                                                         >  2:281019/1‑141 (MQ=255)               aTTTGATCTTCGTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGa                                                                                                                      <  1:298502/141‑1 (MQ=255)                  tGATCTTCGTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGc                                                                                                                   >  2:290032/1‑141 (MQ=255)                  tGATCTTCGTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGc                                                                                                                   >  2:770535/1‑141 (MQ=255)                    aTCTTCGTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTa                                                                                                                 <  2:6493/141‑1 (MQ=255)                     tCTTCGTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTAt                                                                                                                >  1:635412/1‑141 (MQ=255)                     tCTTCGTAGTGATGAACTATTACATTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACACGAAAAGATATAAAAACTACAATAAGATTTCAGAAAAAAAAAAAAAGGAACAAAACGATGCTAt                                                                                                                <  2:423387/141‑1 (MQ=255)                      cTTCGTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTAtt                                                                                                               >  1:430360/1‑141 (MQ=255)                          gTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGata                                                                                                           >  1:134332/1‑141 (MQ=255)                                ttgAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGAAACAAAACGATGCTATTGATATGacac                                                                                                     >  1:551281/1‑141 (MQ=255)                                 tgAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGAcaca                                                                                                    <  2:438826/141‑1 (MQ=255)                                 tgAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGAcaca                                                                                                    <  1:281019/141‑1 (MQ=255)                                 tgAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAACAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGAcaca                                                                                                    <  1:431346/141‑1 (MQ=255)                                   aaCTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACaaa                                                                                                  <  1:153886/141‑1 (MQ=255)                                     cTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATc                                                                                                >  2:486052/1‑141 (MQ=255)                                           ctttcCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAAt                                                                                          <  1:356992/141‑1 (MQ=255)                                           ctttcCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAAt                                                                                          >  1:396020/1‑141 (MQ=255)                                            tttcCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATa                                                                                         >  1:232751/1‑141 (MQ=255)                                              tcCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAgc                                                                                       <  1:709314/141‑1 (MQ=255)                                               ccACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAgct                                                                                      >  2:401887/1‑141 (MQ=255)                                                 acaTTCGAAATTGGCTTCCTTTTATCAATAAGTTTAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGATATTGATATGACACAAATCATAAATAgctgc                                                                                    <  2:254162/141‑1 (MQ=255)                                                   aTTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCtt                                                                                  <  2:311288/141‑1 (MQ=255)                                                    ttCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCttt                                                                                 <  1:47426/141‑1 (MQ=255)                                                    ttCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCttt                                                                                 <  2:702890/141‑1 (MQ=255)                                                     tCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTg                                                                                <  2:7101/141‑1 (MQ=255)                                                     tCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCGATTGATATGACACAAATCATAAATAGCTGCTTTg                                                                                >  2:710831/1‑141 (MQ=255)                                                     tCGAAATCGACTTCCTTTTTTATATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTg                                                                                <  1:786979/141‑1 (MQ=255)                                                      cGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGt                                                                               >  1:50338/1‑141 (MQ=255)                                                      cGAAATCGACTTCCTTTTTTCTATAAGATCAATCCTATTTTAACTCAACAGATATAAAAACTACACTAAGATGCCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGCCCCAAATCCTAAACAGATACTTTGt                                                                               >  2:292374/1‑141 (MQ=255)                                                        aaaTCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTc                                                                             <  1:249012/141‑1 (MQ=255)                                                         aaTCGACTTCCTTTTTTTTTTAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTcc                                                                            >  2:584645/1‑141 (MQ=255)                                                          aTCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCt                                                                           <  1:280337/141‑1 (MQ=255)                                                          aTCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCt                                                                           >  1:129626/1‑141 (MQ=255)                                                           tCGACTTCCTTTTTTATATAAGGTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACTAATCTTAAATATCTGCTTTGTTCCtt                                                                          >  2:669613/1‑141 (MQ=255)                                                             gACTTCCTTTTTTTTTTAATTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCtttt                                                                        >  2:358292/1‑141 (MQ=255)                                                              aCTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCttttt                                                                       <  1:510555/141‑1 (MQ=255)                                                               cTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCtttttt                                                                      <  2:430360/141‑1 (MQ=255)                                                                     tttttCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTta                                                                <  1:223845/141‑1 (MQ=255)                                                                         tttttttttttaaTTCTATTTAACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATTACGCAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTtatata                                                            >  2:806074/12‑141 (MQ=255)                                                                            ataAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATAttt                                                         >  2:622782/1‑141 (MQ=255)                                                                             ttttttAAATTCTATATTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTa                                                        >  2:653044/5‑141 (MQ=255)                                                                                    aaTTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATaca                                                 >  2:414036/1‑141 (MQ=255)                                                                                    aaTTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATaca                                                 <  1:808774/141‑1 (MQ=255)                                                                                    aaTTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATaca                                                 >  2:267025/1‑141 (MQ=255)                                                                                    aaTTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATaca                                                 <  2:678079/141‑1 (MQ=255)                                                                                       tCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCATTGTTCCTTTTTTAATTTATATATTTAAAATaaaccc                                              >  1:481049/1‑139 (MQ=255)                                                                                          aTTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATAtt                                           >  1:840944/1‑141 (MQ=255)                                                                                            tttACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACCATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCa                                         >  2:532663/1‑141 (MQ=255)                                                                                             ttACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCaa                                        <  1:579391/141‑1 (MQ=255)                                                                                              tACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAag                                       <  2:134332/141‑1 (MQ=255)                                                                                                 aTGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGc                                    <  2:725792/141‑1 (MQ=255)                                                                                                  tGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCt                                   >  1:757848/1‑141 (MQ=255)                                                                                                   gAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTc                                  <  2:68381/141‑1 (MQ=255)                                                                                                    aaaaGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAgctgct                                                                                   >  1:323894/1‑91 (MQ=255)                                                                                                    aaaaGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAgctgct                                                                                   <  2:323894/91‑1 (MQ=255)                                                                                                       aGATATAAAAACTACAATAAGATGTCAGAAAGTAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACAAATAGTCAAGAGCTCgaga                              >  1:810632/1‑141 (MQ=255)                                                                                                        gATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGat                             >  2:298363/1‑141 (MQ=255)                                                                                                         atatAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGata                            <  1:257257/141‑1 (MQ=255)                                                                                                         atatAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGata                            <  1:238816/141‑1 (MQ=255)                                                                                                          tataAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGatat                           <  1:290032/141‑1 (MQ=255)                                                                                                          tataAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGatat                           >  1:143034/1‑141 (MQ=255)                                                                                                           ataAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGAtata                          <  2:391043/141‑1 (MQ=255)                                                                                                           ataAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGAtata                          <  1:340387/141‑1 (MQ=255)                                                                                                            taAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATaa                         <  1:622782/141‑1 (MQ=255)                                                                                                            taAAAACTACAATAAAATGTCAGAAGATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTTATTTATATATTTAAAATACACATATTCAAAAGCTCGAGTTATaa                         >  1:280048/1‑141 (MQ=255)                                                                                                             aaaaaCTACAATAAGATGTCAGAAAATAATAAAAAGGAATAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAg                        <  1:624154/141‑1 (MQ=255)                                                                                                             aaaaaCTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAg                        <  2:635412/141‑1 (MQ=255)                                                                                                             aaaaaCTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAg                        <  1:500416/141‑1 (MQ=255)                                                                                                              aaaaCTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGt                       >  2:311044/1‑141 (MQ=255)                                                                                                               aaaCTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGtt                      <  1:800396/141‑2 (MQ=255)                                                                                                                aaCTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACATATATTCAAGAGCTCGAGATATAAGTCa                     <  2:642741/141‑1 (MQ=255)                                                                                                                  cTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATGTAAGTCAAt                   <  1:741909/141‑1 (MQ=255)                                                                                                                  cTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATCTAAGTCAAt                   <  1:741919/141‑1 (MQ=255)                                                                                                                  cTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAAt                   <  2:686633/141‑1 (MQ=255)                                                                                                                   tACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATg                  >  2:195146/1‑141 (MQ=255)                                                                                                                    aCAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGt                 >  2:759569/1‑141 (MQ=255)                                                                                                                       aTAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACt              >  2:790232/1‑141 (MQ=255)                                                                                                                        tAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAACTCATAAAGCGGGGCTGTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTa             <  1:79427/141‑1 (MQ=255)                                                                                                                         aaGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAg            >  2:134505/1‑141 (MQ=255)                                                                                                                          aGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAgg           <  1:826971/141‑1 (MQ=255)                                                                                                                          aGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAgg           <  1:658342/141‑1 (MQ=255)                                                                                                                           gATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGc          <  2:749137/141‑1 (MQ=255)                                                                                                                             tGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGcac        <  1:770535/141‑1 (MQ=255)                                                                                                                              gTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGcaca       <  2:26215/141‑1 (MQ=255)                                                                                                                              gTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGcaca       <  1:401887/141‑1 (MQ=255)                                                                                                                               tCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGcacac      >  2:293517/1‑141 (MQ=255)                                                                                                                                cAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGcacaca     >  2:18832/1‑141 (MQ=255)                                                                                                                                cAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAACTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCATGAGTTCGAGTAATAAGTCAATGtcttacgcaagga     >  2:72546/1‑129 (MQ=255)                                                                                                                                 aGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACaa    >  1:582031/1‑141 (MQ=255)                                                                                                                                 aGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACaa    >  1:141757/1‑141 (MQ=255)                                                                                                                                   aaaaTAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAAtt  <  1:755374/141‑1 (MQ=255)                                                                                                                                   aaaaTAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAAtt  <  1:788421/141‑1 (MQ=255)                                                                                                                                    aaaTAATAAAAAGGAACAAAACGATGCTATTGATATGACACaaa                                                                                                  >  1:461786/1‑44 (MQ=255)                                                                                                                                    aaaTAATAAAAAGGAACAAAACGATGCTATTGATATGACACaaa                                                                                                  <  2:461786/44‑1 (MQ=255)                                                                                                                                           |                                                                                                                                     TTAAGTCATTAATGATTTGATCTTCGTATTGTTGAACTTTTTCTTTCCACATTCGAAATCGACTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATT  >  CP000730/1873273‑1873543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.