New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1873411 =	100 (1.410)	3 (0.050)	3/244	10.5	3.5%	intergenic (‑87/+663)	USA300HOU_1742/USA300HOU_1743	M20 family peptidase/hypothetical protein
	?	CP000730	1873475 =	73 (1.140)					intergenic (‑151/+599)	USA300HOU_1742/USA300HOU_1743	M20 family peptidase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAAT  >  CP000730/1873335‑1873614                                                                                                                                             |                                                                                                                                            cTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCtttttt                                                                                                                                             <  2:430360/141‑1 (MQ=255)       tttttCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTta                                                                                                                                       <  1:223845/141‑1 (MQ=255)           tttttttttttaaTTCTATTTAACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATTACGCAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTtatata                                                                                                                                   >  2:806074/12‑141 (MQ=255)              ataAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATAttt                                                                                                                                >  2:622782/1‑141 (MQ=255)               ttttttAAATTCTATATTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTa                                                                                                                               >  2:653044/5‑141 (MQ=255)                      aaTTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATaca                                                                                                                        <  1:808774/141‑1 (MQ=255)                      aaTTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATaca                                                                                                                        <  2:678079/141‑1 (MQ=255)                      aaTTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATaca                                                                                                                        >  2:414036/1‑141 (MQ=255)                      aaTTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATaca                                                                                                                        >  2:267025/1‑141 (MQ=255)                         tCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCATTGTTCCTTTTTTAATTTATATATTTAAAATaaaccc                                                                                                                     >  1:481049/1‑139 (MQ=255)                            aTTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATAtt                                                                                                                  >  1:840944/1‑141 (MQ=255)                              tttACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACCATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCa                                                                                                                >  2:532663/1‑141 (MQ=255)                               ttACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCaa                                                                                                               <  1:579391/141‑1 (MQ=255)                                tACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAag                                                                                                              <  2:134332/141‑1 (MQ=255)                                   aTGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGc                                                                                                           <  2:725792/141‑1 (MQ=255)                                    tGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCt                                                                                                          >  1:757848/1‑141 (MQ=255)                                     gAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTc                                                                                                         <  2:68381/141‑1 (MQ=255)                                         aGATATAAAAACTACAATAAGATGTCAGAAAGTAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACAAATAGTCAAGAGCTCgaga                                                                                                     >  1:810632/1‑141 (MQ=255)                                          gATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGat                                                                                                    >  2:298363/1‑141 (MQ=255)                                           atatAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGata                                                                                                   <  1:257257/141‑1 (MQ=255)                                           atatAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGata                                                                                                   <  1:238816/141‑1 (MQ=255)                                            tataAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGatat                                                                                                  >  1:143034/1‑141 (MQ=255)                                            tataAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGatat                                                                                                  <  1:290032/141‑1 (MQ=255)                                             ataAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGAtata                                                                                                 <  2:391043/141‑1 (MQ=255)                                             ataAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGAtata                                                                                                 <  1:340387/141‑1 (MQ=255)                                              taAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATaa                                                                                                <  1:622782/141‑1 (MQ=255)                                              taAAAACTACAATAAAATGTCAGAAGATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTTATTTATATATTTAAAATACACATATTCAAAAGCTCGAGTTATaa                                                                                                >  1:280048/1‑141 (MQ=255)                                               aaaaaCTACAATAAGATGTCAGAAAATAATAAAAAGGAATAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAg                                                                                               <  1:624154/141‑1 (MQ=255)                                               aaaaaCTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAg                                                                                               <  2:635412/141‑1 (MQ=255)                                               aaaaaCTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAg                                                                                               <  1:500416/141‑1 (MQ=255)                                                aaaaCTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGt                                                                                              >  2:311044/1‑141 (MQ=255)                                                 aaaCTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGtt                                                                                             <  1:800396/141‑2 (MQ=255)                                                  aaCTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACATATATTCAAGAGCTCGAGATATAAGTCa                                                                                            <  2:642741/141‑1 (MQ=255)                                                    cTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATGTAAGTCAAt                                                                                          <  1:741909/141‑1 (MQ=255)                                                    cTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATCTAAGTCAAt                                                                                          <  1:741919/141‑1 (MQ=255)                                                    cTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAAt                                                                                          <  2:686633/141‑1 (MQ=255)                                                     tACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATg                                                                                         >  2:195146/1‑141 (MQ=255)                                                      aCAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGt                                                                                        >  2:759569/1‑141 (MQ=255)                                                         aTAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACt                                                                                     >  2:790232/1‑141 (MQ=255)                                                          tAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAACTCATAAAGCGGGGCTGTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTa                                                                                    <  1:79427/141‑1 (MQ=255)                                                           aaGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAg                                                                                   >  2:134505/1‑141 (MQ=255)                                                            aGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAgg                                                                                  <  1:826971/141‑1 (MQ=255)                                                            aGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAgg                                                                                  <  1:658342/141‑1 (MQ=255)                                                             gATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGc                                                                                 <  2:749137/141‑1 (MQ=255)                                                               tGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGcac                                                                               <  1:770535/141‑1 (MQ=255)                                                                gTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGcaca                                                                              <  2:26215/141‑1 (MQ=255)                                                                gTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGcaca                                                                              <  1:401887/141‑1 (MQ=255)                                                                 tCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGcacac                                                                             >  2:293517/1‑141 (MQ=255)                                                                  cAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGcacaca                                                                            >  2:18832/1‑141 (MQ=255)                                                                  cAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAACTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCATGAGTTCGAGTAATAAGTCAATGtcttacgcaagga                                                                            >  2:72546/1‑129 (MQ=255)                                                                   aGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACaa                                                                           >  1:582031/1‑141 (MQ=255)                                                                   aGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACaa                                                                           >  1:141757/1‑141 (MQ=255)                                                                     aaaaTAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAAtt                                                                         <  1:755374/141‑1 (MQ=255)                                                                     aaaaTAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAAtt                                                                         <  1:788421/141‑1 (MQ=255)                                                                                aaGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACa                                                              <  1:298363/141‑1 (MQ=255)                                                                                     aCAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAAt                                                         >  2:36583/1‑141 (MQ=255)                                                                                     aCAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAAt                                                         >  1:802206/1‑141 (MQ=255)                                                                                        aaaCGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTaa                                                      >  2:383281/1‑141 (MQ=255)                                                                                                     gATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATg                                         >  2:229009/1‑141 (MQ=255)                                                                                                       tatGACACAAATCATAAATAGCTGCTTTTTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACGAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATgcg                                       <  2:44287/141‑1 (MQ=255)                                                                                                         ttacacAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCTAGATATAAGTCAATGTACTAGGCGCACAATTTAATATTGACAGTCATTAACCGAACGAAAATGCGcc                                     <  2:807906/139‑1 (MQ=255)                                                                                                            cacaAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCg                                  >  1:299364/1‑141 (MQ=255)                                                                                                             acaAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCgg                                 <  1:624197/141‑1 (MQ=255)                                                                                                             acaAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCgg                                 <  1:267336/141‑1 (MQ=255)                                                                                                                aaTCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACaa                                                                           <  2:702332/96‑1 (MQ=255)                                                                                                                aaTCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACaa                                                                           >  1:702332/1‑96 (MQ=255)                                                                                                                 aTCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCGGGGcc                             <  2:129626/141‑1 (MQ=255)                                                                                                                 aTCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCGGGGcc                             >  1:654022/1‑141 (MQ=255)                                                                                                                  tCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCGGGGccc                            <  1:408347/141‑1 (MQ=255)                                                                                                                   cATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCGGGGcccc                           >  1:149560/1‑141 (MQ=255)                                                                                                                           gctgctTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATaga                   <  1:778883/141‑1 (MQ=255)                                                                                                                            ctgctTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATagag                  >  2:381097/1‑141 (MQ=255)                                                                                                                              gctTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGaa                <  2:560271/141‑1 (MQ=255)                                                                                                                                   gTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCg           <  1:653044/141‑1 (MQ=255)                                                                                                                                     tCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGaa         <  1:195146/141‑1 (MQ=255)                                                                                                                                      ccTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGaaa        >  2:579189/1‑141 (MQ=255)                                                                                                                                      ccTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGaaa        <  1:18832/141‑1 (MQ=255)                                                                                                                                       cTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCACTGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGCACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTcttttc       <  1:382650/141‑6 (MQ=255)                                                                                                                                         tttttAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTcttttcga     <  1:134505/141‑8 (MQ=255)                                                                                                                                           tttAATTTATATATTTAAAATACACAGATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATGTAATATTGACAGTAATTAACCTAACGAATAGGCGCCCCGGTGCCCCTACATAGCGACTTACGAAAAGaaa   <  2:389077/141‑1 (MQ=255)                                                                                                                                            ttAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAAt  <  1:806074/141‑1 (MQ=255)                                                                                                                                             |                                                                                                                                            CTTCCTTTTTTCTATAAGTTAAATTCTATTTTACATGAAAAGATATAAAAACTACAATAAGATGTCAGAAAATAATAAAAAGGAACAAAACGATGCTATTGATATGACACAAATCATAAATAGCTGCTTTGTTCCTTTTTTAATTTATATATTTAAAATACACATATTCAAGAGCTCGAGATATAAGTCAATGTACTAGGCACACAATTTAATATTGACAGTAATTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAAT  >  CP000730/1873335‑1873614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.