BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2753848	127 (1.170)	7 (0.090) +ATACTTATAAAATTCAAAATCTTATGCATCATTA	7/200	11.2	7.2%	intergenic (+129/+59)	USA300HOU_2608/USA300HOU_2609	possible transcriptional regulator/possible metallo‑beta‑lactamase
*	?	CP000730	2754851 =	117 (1.070)	7 (0.090) +ATACTTATAAAATTCAAAATCTTATGCATCATTA	7/200	11.2	7.2%	intergenic (‑258/+6)	USA300HOU_2609/betT	possible metallo‑beta‑lactamase/BCCT family betaine/carnitine/choline transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 118 total aligned reads displayed.

ACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATGATTAAAAATGATATCA  >  CP000730/2754712‑2754990

aCTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCtt                                                                                                                                            >  2:42454/1‑141 (MQ=255)

 cTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATGAAGGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGGCGTCCCAGACCCGCttt                                                                                                                                           >  2:831432/1‑141 (MQ=255)

      aGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAAtt                                                                                                                                      >  2:583856/1‑141 (MQ=255)

       gtaCTAAAAGATTTAATTTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATta                                                                                                                                     >  1:382228/3‑141 (MQ=255)

       gCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATta                                                                                                                                     >  2:852749/1‑141 (MQ=255)

          cTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAAGGCTACTAAAAAAAGAGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATaa                                                                                                                                  <  1:345358/141‑1 (MQ=255)

                aaTTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATc                                                                                                                            <  1:65553/141‑1 (MQ=255)

                    aaaTCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATCTTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCt                                                                                                                        >  1:656897/1‑141 (MQ=255)

                    aaaTCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCt                                                                                                                        >  2:1254455/1‑141 (MQ=255)

                    aaaTCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCt                                                                                                                        >  1:799433/1‑141 (MQ=255)

                     aaTCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCtt                                                                                                                       <  2:1154716/141‑1 (MQ=255)

                     aaTCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCtt                                                                                                                       >  1:902635/1‑141 (MQ=255)

                     aaTCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCtt                                                                                                                       >  1:468878/1‑141 (MQ=255)

                      aTCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTg                                                                                                                      >  2:92679/1‑141 (MQ=255)

                           ttAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACGGAAAGGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGttctt                                                                                                                 <  1:1312293/141‑1 (MQ=255)

                           ttAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGttctt                                                                                                                 >  2:379646/1‑141 (MQ=255)

                            ctcttccgatctAATGAAAACCTAAAAGTACAGCCTACAATGCTACT‑AAAAAAGACGAATGGAACAGCACTGATACCTTCACCAACGTCATTTCGTCGTTCCAGTCTTGCTTTGAATCGTTAATTTTCGTCGTGttcttct                                                                                                               <  2:1217153/130‑1 (MQ=255)

                              gTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGttcttctt                                                                                                              <  2:308234/141‑1 (MQ=255)

                               tACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGttcttcttc                                                                                                             >  1:1285648/1‑141 (MQ=255)

                                acaacaTTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTtcttcttct                                                                                                            >  2:1058608/1‑141 (MQ=255)

                                       tAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACtt                                                                                                     <  1:103140/141‑1 (MQ=255)

                                        aaTGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTg                                                                                                    >  2:632668/1‑141 (MQ=255)

                                        aaTGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCACAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTg                                                                                                    >  1:1140339/1‑141 (MQ=255)

                                         aTGAAAACCTAAAAGTTCAACCTACAATACAACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGa                                                                                                   <  2:519373/141‑1 (MQ=255)

                                          tGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGaa                                                                                                  <  1:420628/141‑1 (MQ=255)

                                           gAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAACTTATCGTCTTGTTCTTCTTCTGATACTTGAAc                                                                                                 >  1:892440/1‑141 (MQ=255)

                                           gAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAAc                                                                                                 <  2:1017123/141‑1 (MQ=255)

                                           gAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAAc                                                                                                 >  1:414121/1‑141 (MQ=255)

                                            aaaaCCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACg                                                                                                <  2:902635/141‑1 (MQ=255)

                                              aaCCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGAt                                                                                              <  1:995261/141‑1 (MQ=255)

                                              aaCCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAAGGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGAt                                                                                              >  1:1052029/1‑141 (MQ=255)

                                               aCCTAAAAGTTCATCATACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGAtt                                                                                             <  2:399152/141‑1 (MQ=255)

                                                  tAAAAGTTCATCCTACAATGCTACT‑AAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACttagatcggaagag                                                                                         >  1:1217153/1‑129 (MQ=38)

                                                   aaaaGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATATTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATGATTTGTTGTTTTGTTCTTCTTCTGATACTTGAACGATTCGCa                                                                                         <  2:1105480/141‑1 (MQ=255)

                                                   aaaaGTTCACCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCa                                                                                         <  1:702555/141‑1 (MQ=255)

                                                      aGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATg                                                                                      >  2:996741/1‑141 (MQ=255)

                                                       gTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGCTCTTCTTCTGATACTTGAACGATTCGCACTGa                                                                                     >  2:9196/1‑141 (MQ=255)

                                                         tCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAac                                                                                   <  2:487604/141‑1 (MQ=255)

                                                         tCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAac                                                                                   >  2:1028736/1‑141 (MQ=255)

                                                          cATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGa                                                                                                          <  2:200772/117‑1 (MQ=255)

                                                          cATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGa                                                                                                          >  1:200772/1‑117 (MQ=255)

                                                          cATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAacg                                                                                  >  2:885205/1‑141 (MQ=255)

                                                           aTCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAacga                                                                                 >  2:1219087/1‑141 (MQ=255)

                                                           aTCCTACAATGCTACTAAAAAAAGGGAAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATAATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAacga                                                                                 >  1:1192159/1‑141 (MQ=255)

                                                            tCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAacgac                                                                                >  1:934654/1‑141 (MQ=255)

                                                                        actaAAAAAAGGGGAGTGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAActtctt                                                                    <  1:1153928/141‑1 (MQ=255)

                                                                        actaAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAActtctt                                                                    >  2:1175738/1‑141 (MQ=255)

                                                                        actaAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAActtctt                                                                    <  2:343701/141‑1 (MQ=255)

                                                                         ctaAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCttt                                                                                                                                           <  1:1039263/69‑1 (MQ=255)

                                                                                aaGGGGAATGGAACAGAAATGATATTTTCACATAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAAtttt                                                            <  1:1153554/141‑1 (MQ=255)

                                                                                aaGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAAtttt                                                            <  2:604751/141‑1 (MQ=255)

                                                                                aaGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAAtttt                                                            >  2:479776/1‑141 (MQ=255)

                                                                                aaGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAAtttt                                                            <  1:852749/141‑1 (MQ=255)

                                                                                   gggAATGGAACAGAAATGATATTTTCACAAAATTCATTTCTTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCa                                                         >  2:651446/1‑141 (MQ=255)

                                                                                   gggAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTcc                                                         >  2:723220/1‑140 (MQ=255)

                                                                                   gggAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCa                                                         >  2:545319/1‑141 (MQ=255)

                                                                                      aaTGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCa                                                      >  2:936429/1‑141 (MQ=255)

                                                                                       aTGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCAc                                                     <  2:90139/141‑1 (MQ=255)

                                                                                          gAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCAcgcg                                                  <  1:42454/141‑1 (MQ=255)

                                                                                             cAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGttt                                               <  1:92655/141‑1 (MQ=255)

                                                                                             cAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGttt                                               <  2:1162396/141‑1 (MQ=255)

                                                                                             cAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGttt                                               <  1:92679/141‑1 (MQ=255)

                                                                                             cAGAAATGATACTTTCACACAATTCATTTCGTCGTCCAAGACCCGATTTGCATTCTAAATTATCCTCTTGTTCTTCTACTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGttt                                               <  1:831432/141‑1 (MQ=255)

                                                                                              aGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTc                                              <  2:206417/141‑1 (MQ=255)

                                                                                              aGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGCTTc                                              >  1:1038745/1‑141 (MQ=255)

                                                                                               gAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCa                                             <  1:986598/141‑1 (MQ=255)

                                                                                                 aaTGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAg                                           <  1:565649/141‑1 (MQ=255)

                                                                                                 aaTGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTACTTTTAATTTTTCAGCACGCGTTTCaac                                           >  1:1294537/1‑140 (MQ=255)

                                                                                                  aTGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGt                                          <  1:494517/141‑1 (MQ=255)

                                                                                                    gATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGttt                                        <  1:818575/141‑1 (MQ=255)

                                                                                                             acaAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATc                               <  2:408214/141‑1 (MQ=255)

                                                                                                              caAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATcg                              <  2:220992/141‑1 (MQ=255)

                                                                                                               aaaaTTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATcgc                             <  2:1113526/141‑1 (MQ=255)

                                                                                                                 aaTTCATATCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCgcgc                           >  1:1099924/1‑141 (MQ=255)

                                                                                                                   ttCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGccc                         <  1:891995/141‑1 (MQ=255)

                                                                                                                    tCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCTATGGTCGACGTTCAACTTCTCGCAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCt                        >  1:969287/1‑141 (MQ=255)

                                                                                                                     cATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTa                       >  2:739273/1‑141 (MQ=255)

                                                                                                                      aTTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTaa                      >  2:724577/1‑141 (MQ=255)

                                                                                                                       tttCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTaaa                     <  1:936721/141‑1 (MQ=255)

                                                                                                                        ttCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTaaaa                    >  2:465619/1‑141 (MQ=255)

                                                                                                                         tcgtcgTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAAt                   <  2:1099924/141‑1 (MQ=255)

                                                                                                                          cgtcgtCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATg                  >  1:552406/1‑141 (MQ=255)

                                                                                                                          cgtcgtCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATg                  <  2:115025/141‑1 (MQ=255)

                                                                                                                            tcgtcCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATGAt                <  1:854319/141‑1 (MQ=255)

                                                                                                                            tcgtcCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATGAt                <  1:125624/141‑1 (MQ=255)

                                                                                                                             cgtcCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATGAtt               <  1:583856/141‑1 (MQ=255)

                                                                                                                               tcCCAGACCCGCTTTGAATTATAAATTATCGTCTTGttcttctt                                                                                                              >  2:334506/1‑44 (MQ=255)

                                                                                                                               tcCCAGACCCGCTTTGAATTATAAATTATCGTCTTGttcttctt                                                                                                              <  1:334506/44‑1 (MQ=255)

                                                                                                                                cccAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATGATTaaa            <  2:595032/141‑1 (MQ=255)

                                                                                                                                cccAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATGATTaaa            <  2:209716/141‑1 (MQ=255)

                                                                                                                                 ccAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATGATTaaaa           <  2:934654/141‑1 (MQ=255)

                                                                                                                                  gcatcattatttGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATGATTaaaaa          <  1:282713/132‑1 (MQ=255)

                                                                                                                                   aGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATGATTAAAAAt         <  1:1102165/141‑1 (MQ=255)

                                                                                                                                   aGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATGATTAAAAAt         <  1:980342/141‑1 (MQ=255)

                                                                                                                                   aGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCACTAaaaaaataaaaaat         <  2:156201/141‑1 (MQ=255)

                                                                                                                                   aGACCCGCTTTGAATGATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTGTATCGCGCCCTAAAATGATTAAAAAt         <  2:950817/141‑1 (MQ=255)

                                                                                                                                    gACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATGaaacaacatg        >  2:51559/1‑132 (MQ=255)

                                                                                                                                         gCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATGATTAAAAATGATatc   >  2:1347538/1‑141 (MQ=255)

                                                                                                                                          cTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATGATTAAAAATGATatca  <  2:468878/141‑1 (MQ=255)

                                                                                                                                          cTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATGATTAAAAATGATatca  >  1:887226/1‑141 (MQ=255)

ACTTGGAGCACTAAAAAATTAAATCTTTTAGTACAACATTAATGAAAACCTAAAAGTTCATCCTACAATGCTACTAAAAAAAGGGGAATGGAACAGAAATGATATTTTCACAAAATTCATTTCGTCGTCCCAGACCCGCTTTGAATTATAAATTATCGTCTTGTTCTTCTTCTGATACTTGAACGATTCGCAATGAACGACGTTCAACTTCTTTTAATTTTTCAGCACGCGTTTCAAGTTTAATTCTATCGCGCCCTAAAATGATTAAAAATGATATCA  >  CP000730/2754712‑2754990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.