mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.32.0b
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 65 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3938338 | NA (NA) | 18 (0.220) | 11/276 | 9.3 | 34.3% | noncoding (1275/2904 nt) | rrlC | 23S ribosomal RNA of rrnC operon |
| ? | CP009273 | = 4032171 | 36 (0.410) | noncoding (1293/2905 nt) | rrlA | 23S ribosomal RNA of rrnA operon | |||||
| * | ? | CP009273 | 2721250 = | NA (NA) | 18 (0.220) | 11/276 | 9.3 | NA | noncoding (1294/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon |
| ? | CP009273 | 2721269 = | NA (NA) | noncoding (1275/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon | |||||
| * | ? | CP009273 | = 223539 | 43 (0.500) | 18 (0.220) | 11/276 | 9.3 | 30.4% | noncoding (1294/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| ? | CP009273 | 2721269 = | NA (NA) | noncoding (1275/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon | |||||
| * | ? | CP009273 | 2298321 = | NA (NA) | 13 (0.160) | 9/274 | 10.2 | 18.1% | noncoding (426/655 nt) | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences |
| ? | CP009273 | 2298402 = | 62 (0.710) | noncoding (507/655 nt) | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences | |||||
| * | ? | CP009273 | 2298095 = | NA (NA) | 12 (0.150) | 8/274 | 10.8 | 18.9% | noncoding (200/655 nt) | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences |
| ? | CP009273 | 2298176 = | 54 (0.620) | noncoding (281/655 nt) | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences | |||||
| * | ? | CP009273 | 2298070 = | NA (NA) | 12 (0.150) | 8/274 | 10.8 | 12.7% | noncoding (175/655 nt) | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences |
| ? | CP009273 | 2298088 = | 87 (1.000) | noncoding (193/655 nt) | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences | REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences | |||||
| * | ? | CP009273 | = 4032158 | 42 (0.480) | 17 (0.200) | 7/276 | 11.4 | 30.8% | noncoding (1280/2905 nt) | rrlA | 23S ribosomal RNA of rrnA operon |
| ? | CP009273 | = 4032165 | 36 (0.430) | noncoding (1287/2905 nt) | rrlA | 23S ribosomal RNA of rrnA operon | |||||
| * | ? | CP009273 | = 3938351 | NA (NA) | 17 (0.200) | 7/276 | 11.4 | 29.7% | noncoding (1288/2904 nt) | rrlC | 23S ribosomal RNA of rrnC operon |
| ? | CP009273 | = 4032158 | 42 (0.480) | noncoding (1280/2905 nt) | rrlA | 23S ribosomal RNA of rrnA operon | |||||
| * | ? | CP009273 | = 3586004 | NA (NA) | 7 (0.080) | 7/274 | 11.4 | NA | noncoding (81/99 nt) | RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | CP009273 | = 3586015 | NA (NA) | noncoding (92/99 nt) | RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP258 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
| * | ? | CP009273 | = 223539 | 43 (0.500) | 17 (0.200) | 7/276 | 11.4 | 29.0% | noncoding (1294/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| ? | CP009273 | = 4032152 | 42 (0.500) | noncoding (1274/2905 nt) | rrlA | 23S ribosomal RNA of rrnA operon | |||||